KEGG   Henckelia pumila: 140882113
Entry
140882113         CDS       T11037                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
hpum  Henckelia pumila
Pathway
hpum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    140882113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpum03009]
    140882113
Ribosome biogenesis [BR:hpum03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    140882113
SSDB
Motif
Pfam: Utp21 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 PEP5_VPS11_N Beta-prop_LRRK2 Beta-prop_WDR75_2nd Ge1_WD40 RMC1_N VID27 Nbas_N VPS8_N Cytochrom_D1 DUF5463 WDCP
Other DBs
NCBI-GeneID: 140882113
NCBI-ProteinID: XP_073143979
LinkDB
Position
2:complement(159477833..159484045)
AA seq 911 aa
MGIFEPFRSIGYITTGVPFSVQRLGTETFVTVSVGKAFQIYNCAKLTLVLVGPQLPKKIR
ALASHRDYTFAAYGSKIAVFKRAHQVAIWGSHGAKINHFLLFGEHILSLDVKGNLFMWPF
KEITDDISPVGHISLGTKFSVSCIMHPDTYLNKVIFGSQEGPLQLWNISTKNKLHEFKGW
NAAICCCVSSPALHVIAVGCSDGKIHVHNILYDEEVVTFTHSTSGAVTALSFSTDGQPLL
AAGGSSGVVSIWNLEKRKLHSVIREAHDSSIVSLHFFACEPVLMSSSADNSVKMWIFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSGGHDCAFRLFSVVQDQQSRELSQRHASKR
AKRLKLKETEIKLKPVITFDVAEIRERDWCNVVTCHMDTAQAYVWRLQNFVIGEHILSPS
TQDTMPVKACAISACGNFAVIGTAGGWIERFNLQSGISRGNYVDMTERKTSAHAGEVVGI
ACDSTNTIMISAGYHGDVKVWDFKGRDLRSRWEIGCSLVKIVYHRYNGLLATVADDLVIR
LFDVISLRMVRKFEGHADRITDMCFSEDGKWLLTSSMDGTLRIWDVILAKQIDAVHVDIP
VTALSLSPNMDILATAHVDQTGIYLWVNYSMFSASNKADSYGSGKEIVSIKLPSVSSLGD
TSHDYDDFTKVNISLQEAKDPSHFQVLDYQISDLVTLSLLPKSRWQSLINLDIIKARNKP
IEPPKKPEKAPFFLPTTPILSGEIFFKARESAEEEKLLQTGETVSSKEAKTDVSESHFLQ
ALQTLSEEKNFAAFTDYIKGLSSSTLDMELRMLQIIDDNDEPQTSNRSKMYSIELLLDYF
IQELLCRKNFEFIQAVLRLFLKIHGESIRQWPALHDKAQKLLEIQSTVWPKIENLFQSTR
CMVTFLSNSFV
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggggattttcgaaccattccgatcgatcggatatattacaacgggcgtcccattctcc
gtgcagcgtctcggcactgagaccttcgtcaccgtcagcgtcggcaaagcatttcaaatc
tacaattgtgctaagctcactctagtgctcgttggtcctcagttgccaaagaagatacgg
gctttggcttctcatcgcgactacacatttgctgcatatgggagtaaaattgcagttttc
aagcgtgctcatcaggtggcgatttgggggagccatggtgcaaagattaatcacttcctt
ctttttggcgaacacatcttaagtctcgatgttaaaggcaacctcttcatgtggccattt
aaagaaataactgacgatatttctccagttggccatatttctttgggaaccaagtttagc
gtgagctgcataatgcatccagatacttatttaaataaggtaatttttggaagtcaggaa
ggtcctctgcaattatggaacattagcacaaagaacaaacttcatgaattcaaaggatgg
aatgccgccatatgttgctgtgtttcatctccggcattgcatgttattgctgttggttgc
tccgatggaaagattcatgtccacaacatcctctacgatgaagaggtggttacatttact
cattctacttctggagctgtgactgctttatctttcagcactgatgggcagcccctttta
gcggctggtggttcatctggtgtcgtaagtatttggaatcttgagaaaaggaagcttcac
tctgtcattagagaggcccatgattcctccatagtttctctccacttttttgcttgtgag
cctgtgctgatgagttcatccgcagacaactctgtgaaaatgtggatttttgatacaagt
gatggggatcctcgcttactacgtttccgaagtggtcacagcgctcctcctctatgtata
aaattttatgccaatggtaggcatattctttctggtggtcatgattgtgcttttcgcctt
ttttctgttgtccaagatcagcaaagtagagaactttcacaacgccatgcatccaaaaga
gcgaagagactgaagctgaaggaaacggaaataaaacttaagcctgttattacgtttgat
gttgctgaaatcagggagcgggattggtgcaatgtagttacctgtcacatggatactgca
caggcatatgtatggaggcttcaaaattttgttattggagagcatattctttcaccaagc
actcaggacactatgccagtgaaggcatgtgcgatcagtgcatgtggtaattttgctgta
attggaactgctgggggttggattgagcggtttaatcttcagtcaggtatcagtcgaggc
aattatgttgatatgacagaaagaaaaaccagtgctcacgcgggagaagtagttggcatt
gcttgtgattcaacaaatacaatcatgataagtgctggataccacggagatgttaaggtt
tgggacttcaagggacgtgacttaagatccagatgggaaattggttgttctctggtaaaa
attgtctatcaccgttacaatggccttttggctaccgtggcagatgatttagttattcgt
ttgtttgatgttatctcattgaggatggttcgaaaatttgaaggtcatgcagatcgtata
acagatatgtgctttagcgaggatgggaaatggcttttgacatccagcatggatgggact
cttagaatttgggatgtgattctagctaaacaaatagatgctgtacatgttgatatccct
gtgacagcattatctctttcaccaaatatggatattttagcaacagctcatgtggatcag
actgggatatatctatgggttaactattcaatgttttctgcatctaataaagctgattcc
tatggaagtggcaaggaaattgttagtatcaagctaccatccgtttcttcactgggagat
acttcacatgactatgacgattttaccaaggttaatatcagccttcaagaagccaaagat
ccttctcatttccaagttttagattaccaaatatctgatcttgtcacgctttccctgttg
cccaagagtcggtggcaaagcctgatcaatttggatattataaaagccaggaacaaaccg
attgagccacccaaaaaaccagagaaggcccctttcttcttaccaacaactccaatttta
tccggggagatattttttaaagctagagaatctgctgaagaagagaagcttttgcaaact
ggtgaaacagttagcagcaaagaggcaaaaactgacgtttcagaatcccatttcttacag
gcccttcagaccttatcagaggaaaagaactttgcagcatttacagattatattaaaggc
ttatcctcttccactttggatatggaacttaggatgcttcagattatagatgacaacgat
gagccacagacaagcaatagatcgaaaatgtattccattgaactcctgctggactatttt
atacaagagcttttatgcaggaagaactttgagtttatacaagctgtgctcagattattt
ttaaagattcatggtgaaagtattcgacaatggccagctttacatgataaagcgcaaaag
cttctagaaattcaatctacagtttggccaaaaatagagaatttgtttcagagcacgaga
tgtatggttacatttcttagtaactcatttgtgtaa

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