Henckelia pumila: 140882243
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Entry
140882243 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hpum Henckelia pumila
Pathway
hpum03013
Nucleocytoplasmic transport
hpum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140882243
03015 mRNA surveillance pathway
140882243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140882243
03041 Spliceosome [BR:
hpum03041
]
140882243
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140882243
Spliceosome [BR:
hpum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
140882243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
140882243
NCBI-ProteinID:
XP_073144211
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All DBs
Position
2:21838210..21844962
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AA seq
925 aa
AA seq
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MSGGFFRGTSTDQDTRFSNKKAKLLKSQKFASELETLVDMTKVKMDVMRPWIAKRVTELI
GFEDEVLINFIYGLLEGKEVNGKEVQISLTGFMERNTGKFMKELWSLLLSAQQNLSGIPQ
QFLDEKEEETKKKKAETDRIAHEILRKKEKEKQELERETTKMDGDGDTLRDKPAELELNS
KPDTMVSSFQPADANKQSERKSMRGRSSPTRNCFLNSLHRDSKSPDLAYRSSSPRWSSRS
VSSSPPRRSRSMSSERRYPTSPRQSPTPRKRHVVQPSPSPPRRRSSYSKRRSISPPRRRS
PSPSRYRARLPRRYRSRSPLSHRSRSPFNRRSRSPFNRKSRSPRRRSRTPIRTSTAHHRS
PSPFRRRSPSPLRRRSPSPVRRRSPSPVRRRSPSPARRRLPSPLKRRTSSPLSDKSPSHV
QRRSPSPLHRRPRSPFHRKPPYVRRDSRSPVRRRYQRSPSTPRQQSKSPVRRMSSTIGRK
RSLSPAPRRSGESSSPSSIRHNSISPVRRESSKSMRSPEQSHGERVRSLEKNSPAHYASP
SEKAELSAKNHRGSKPVDVRPIISLRSPQRDMLDQNDLHGEEPVLSLSKKKTPLVSDASR
ERAHREEQRSSPRDGLHQQRERVIRPESPSPMVKVAGPKPHREHSGASVEDKNNFSAREQ
KYGARGTNSLTSDQRKDLIDSTKVHDDFSKSTKSRLTNSEGPDRTNHREHYEKPASSEIR
KTTSMSERKSESYVDEGDRAGKLTSGPLGDSKKGYRLQESAVLPKLSRKSEMNDLNGSTD
SPSKESDEYKTKVKEKKKHSKSDRHDVESDDSFSDDSYEERKEVKRRRKEEKKLKREEKR
RKRDERHRRKEERRAEKLKLKSADTGNPLSDLEGDYSENDNDHRRVSKTRGNKDSKSEQK
NLEIELREKALESLRAKRGIDISKD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattttttcggggcacgtccaccgatcaggacactcgtttctcgaacaag
aaagccaagcttctcaaatctcagaaattcgcctctgaattggaaaccctggtggacatg
acaaaagtgaagatggatgttatgagaccatggatagcaaagcgtgtcactgagctaatt
gggtttgaggatgaagtacttatcaactttatctatggacttctagagggaaaggaagtc
aatggaaaagaagttcaaatttcacttactggatttatggagagaaacactggaaagttt
atgaaagaattatggtcgttgcttctaagtgcacagcaaaatttgagcggcattccgcag
cagtttcttgatgagaaggaggaggaaactaagaagaagaaggctgagacagatcgtata
gctcatgaaattctaaggaagaaagagaaggagaagcaagaattggaacgagagactacg
aaaatggatggtgatggtgatacattgagagataagcctgctgagttggaactcaattca
aaacctgataccatggtgtctagctttcagccagctgatgcgaacaagcagagtgagaga
aaaagcatgagagggcgctctagcccgacaaggaattgtttcctcaacagtctgcacagg
gattcaaaatctccagatttggcttatcgttcctcctctccaaggtggagttcaagaagt
gtttctagttcacctccacggagaagtcggtctatgtcatctgaaagacggtatcccact
tctccaagacagtccccgacccctcgcaagaggcatgttgttcagccctctccttctcca
ccaaggcgtagatcgtcctattctaaacgaagatcaatttctcctccacgacgtagatct
ccctcccctagtagatatagagcgcgtttacctaggcgatacagatctcggtctccattg
agccatagatcacggtctccctttaatagaaggtcacgatctccctttaatcgaaaatct
cgatccccaaggcgtcggtctaggacaccaatacggacctcaacagcacatcatagatcc
ccctctcctttccggcgtagatccccctctcctttacggcgcagatctccatctcccgtt
cgacgcagatctccatctcctgttcgacgcagatctccatctcctgcacgacggaggttg
ccatctcctctaaaacgtaggacatcatctcctttgagtgacaaatcaccatcacatgtg
cagcgtaggtccccatctcccttgcatcgcaggccacgatctccatttcatcggaagcct
ccgtatgttcgtcgggattcacgatctcctgtaagaaggcgataccagcgatctccttca
actccacggcagcaatctaaatcaccagttcggcgtatgtcctcaacgatcggtcgaaaa
agatctttatccccagcccctcgaagatctggagaatctagctctccctcgtccattcga
cacaattccatttctcctgttaggagagaatcttcaaaaagcatgagatcacctgaacaa
tctcatggagaaagggtcagaagcttagagaaaaattctcctgctcattatgcttctcca
agtgaaaaagctgaactctctgcaaagaatcatagaggatcaaaacctgtggacgtcagg
cccattatttctttgagatcaccacagagggatatgctggatcaaaatgacctccatggg
gaagagccagtgctgtcactttccaagaaaaaaactcctcttgtatcagatgcttctagg
gaaagagctcaccgtgaagagcaaaggtctagtcctcgtgatggtcttcatcagcaaagg
gaaagagtcattcgtcctgagagcccaagccccatggtgaaggttgctgggcctaaacct
catcgtgaacattctggggcaagtgttgaagataagaacaacttttctgccagagagcaa
aaatatggagcacgtggaacgaattctctgacatctgatcaacgtaaagatttaattgac
tctaccaaagttcatgatgatttctcaaagtcaacaaagagccgactgacaaatagcgaa
ggacctgacaggacgaatcatagagaacactatgagaaaccagcgtcatcagaaattcgt
aaaacaacgagcatgagtgagagaaaaagtgaatcatatgtcgatgagggtgacagagct
ggcaaattgactagtggtccgttaggtgatagcaagaaaggttataggttgcaagaatcg
gcagttttgcccaagttgtcaaggaagtctgagatgaatgatctgaatggttctacagat
tctccctccaaggaatctgatgagtacaaaactaaagtcaaagaaaagaagaaacacagc
aagtcagataggcatgatgtggaatcggatgattctttcagtgatgattcttatgaggag
aggaaggaggtcaaaaggaggagaaaagaagaaaaaaagctgaagagagaggagaagcgt
cggaaacgagatgagcgacatcgtagaaaggaagaaaggcgtgcagagaagttgaaattg
aagtcagcggatactggtaacccattatctgatctcgagggagattattcagaaaacgac
aatgatcatagacgcgtgtcaaaaacaagaggaaataaggattctaaatccgagcagaaa
aaccttgagatagagttacgagagaaggctcttgagtcccttcgagccaaaagagggatt
gacatatcaaaggattga
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