Henckelia pumila: 140882298
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Entry
140882298 CDS
T11037
Name
(RefSeq) splicing factor Cactin-like
KO
K25058
cactin
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hpum03041
]
140882298
Spliceosome [BR:
hpum03041
]
Complex C
Other components
Complex C specific factors
140882298
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Gene cluster
GFIT
Motif
Pfam:
CactinC_cactus
Cactin_mid
Motif
Other DBs
NCBI-GeneID:
140882298
NCBI-ProteinID:
XP_073144331
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Position
2:105587756..105597605
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AA seq
650 aa
AA seq
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MLPILQLNRFAPFLDTELGMPSSMGRRRECSVSESDDESKSASRRKSRMRRHQHGDSDDS
EDDVSVSKRKGKRKISEEEIAEYLGKKAQKKAVRVSKKLKSQTISGYSNDSNPFGDSNLN
EKFVWRKKIERDVNQGMPLDEFSIKAERKKQRERMAEIEKVKKRREERAVEKAQHEEEMA
LLARERARAEFQDWEKKEEEFHFEQSKFRSEIRIREGRNKPIDILTKHLEPSDDFEIELN
EPYMVFKGLTVKEMEELHEDIKMHLDLDRATPTHIQYWEALLVVCEWELAEANKRDALER
ARVRGEQLPTEITGEERGLHASIEADVKNLLQGKTYGELEALQSQIESQMRSGTAKVVEY
WEAIIKRLHIYKAKACLKEIHVKMLHKHLERLETPAGVKKEETDVSPPQDEQEFHPDVND
SEILSPQPLMDDEIQEEEAEGAYSPQLMHGDETEDAIDPEEDRMILEKKRIAVKEERRIH
ELALRPAPPVDNFENNALRAMGATEEGDAVFGSNNEINLDSQVYWWHDKYRPRKPKYFNR
VHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPTYTIEKDGDSSETCII
RFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctccctatccttcaactcaaccgctttgcgccattcttggatactgaattagggatg
ccgtcatcaatgggacgtcggcgggagtgttccgtctccgaatcggacgatgaatccaaa
tcagcttctcgtcgcaagagccggatgcgacgccaccaacatggagactcggatgactct
gaagacgatgtctctgtctcgaagagaaagggtaagaggaagatttcagaggaggaaatt
gctgaatacctagggaaaaaggcgcagaaaaaggctgtgagagtttctaaaaaattgaag
tcccagaccatctctggatattccaatgattcaaatccttttggtgattctaatcttaac
gaaaaatttgtatggcgaaagaagattgagcgcgacgtaaatcaaggaatgccattagat
gagttctccatcaaagcggagaggaaaaagcagagagagagaatggctgagattgaaaag
gtcaaaaaaaggagggaggaaagggctgttgagaaagcacaacatgaggaagagatggca
ctgttggcaagagagcgtgctcgagctgagtttcaagactgggagaagaaagaagaagag
tttcatttcgagcaaagtaaatttcggtcggagattcggatacgtgaaggtcgaaacaaa
ccaattgatattctcaccaaacatcttgagccttcagatgattttgagatagagctaaat
gaaccatacatggttttcaagggtttgactgtaaaagaaatggaagagcttcatgaagac
attaagatgcaccttgatttagaccgagcaactcctacccatattcaatattgggaggca
cttctggtggtttgtgaatgggaactagctgaagctaataaaagggatgccctagagcgt
gccagagtgcgaggagagcaactaccaacagagattacaggtgaagaaagaggtttgcat
gcgagcattgaagcagatgttaagaatcttttgcaaggaaaaacctatggtgaactagag
gcccttcaatcccagattgagtctcaaatgcgatctgggactgccaaggtggtggagtat
tgggaagccattattaaacgtctccatatttacaaagcaaaggcttgtttgaaagaaatt
catgtgaaaatgctgcacaagcatttggagcgacttgaaacaccagcgggggttaaaaag
gaagaaacagatgtaagtccaccgcaggatgagcaggagttccacccagatgtaaacgat
tctgaaattctttctccgcaacccttgatggatgatgagatccaagaggaagaagcagaa
ggagcatattccccacagttgatgcatggtgatgagactgaagatgcgattgaccctgag
gaggacagaatgattctggaaaaaaaacgtattgctgtaaaggaagagaggcgtatccac
gaacttgctttaaggccagctcctcctgtggataactttgagaacaatgccttgagagcc
atgggagccaccgaggaaggtgatgctgtatttggctcaaataatgaaattaaccttgat
tcccaggtgtactggtggcatgataaataccgtccaagaaagccaaaatattttaatcgc
gtccacactggctacgagtggaacaaatacaaccaaactcattatgatcatgacaatcct
ccccccaagattgtgcagggatataagttcaatattttttacccagatcttgttgacaaa
ataaaagctccaacttacaccatcgagaaagacggagatagcagcgagacttgtatcatt
aggtttcatgctggacccccttatgaagatattgcattccgtattgtcaataaagaatgg
gagtactcgcacaagaaggggttcaaatgtacatttgagcggggaatcttacatgtctac
ttcaacttcaaacgctaccggtatcgtcggtga
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