Henckelia pumila: 140882494
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Entry
140882494 CDS
T11037
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hpum Henckelia pumila
Pathway
hpum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140882494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
140882494
03036 Chromosome and associated proteins [BR:
hpum03036
]
140882494
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140882494
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140882494
PBAF complex
140882494
GBAF(ncBAF) complex
140882494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF5695
Motif
Other DBs
NCBI-GeneID:
140882494
NCBI-ProteinID:
XP_073144641
LinkDB
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Position
2:132257680..132261183
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AA seq
540 aa
AA seq
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MNHHNIHNHHQPVRGNLSFGIPGGNQMQIPMQMPLNHNQQQIPNMISQNQPPVRPYFPGH
FQPSEPQAQAFAQGQTVQVHTQVQVMATQPQGHINVSISSPSVPTPGSGGAGTGKRLHKP
PSRPSGGSSAQGTASHMKTMELTPAAHRRKRKLPDKAIPDKVAAIVPESALYTQLVEFES
RVDAALTRKKTDILEALKNPVRAQKILRLYLFNTFANQAQTDSVKENAEPPSWTLRIIGR
ILEDGKDHFLEGEVQKSSTSSPKFSTFFKKITIYLDQNLYPDNHVILWESSRSPVLHEGF
EVKRKGDKEFAAVIRLEMNYFPEKFKLSQALREVLGIEVETRPRIIAALWHYVKTRKLQI
SGDTSSFMCDSPLRKVFGEDKLKFSMVMQKITPHLIPPGPIHIEHKIKLSGCSPAGNTCY
DVLVDVPWTLEREMSNFLANVEMNKEIESCDDAIYSAIKKIHEHGQRRAFFLGFSQSPAE
FINSLIASQARDLKLAALDTNRDVEKERQAEFYNQPWIEDAVIRYLNRKTAAGNETPGSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcataatattcataaccaccaccaacctgtgaggggaaatttgagttttgga
attcctggaggaaatcaaatgcaaattccgatgcagatgcccttgaatcataaccagcaa
cagatacccaatatgatttcccagaaccagcctccagttaggccctactttcctggacat
tttcaaccatcagaacctcaggcgcaggcatttgcgcagggccaaacagttcaagtccat
actcaagtgcaagtcatggctacccagcctcagggccacattaatgtcagtatttcctca
ccatctgttcccactcctggctctggaggggctggaacagggaagcgcctgcacaaaccg
ccttctcggccttctgggggctcatcagctcagggaactgcttcccacatgaaaaccatg
gaactgaccccagctgcacatagacggaagcggaagttgccggataaagctatccctgat
aaagttgcagcgattgtgccagaatctgctctttatactcaattggttgaattcgagtca
cgtgtagatgctgcccttacgaggaagaagactgacattttagaagccctgaaaaatcct
gtacgtgctcagaaaatcctgcgtttatatttgttcaacacatttgccaaccaggcacag
acagattccgtgaaggaaaatgctgagcctccttcttggacactccggataattgggaga
attttagaagatggcaaagatcactttttggaaggagaagtgcagaaatcaagcacttca
agcccaaagttttcaactttcttcaagaaaattactatttacttggatcaaaatctgtat
ccagataatcacgtaatactttgggagagctctcgatcacccgtgcttcacgaggggttt
gaggtgaagaggaaaggagacaaggaattcgcggcagttattagattggagatgaattat
ttccccgaaaagtttaagctttcacaagctttgcgtgaagttcttggcattgaggtggag
acacgacctagaattattgcagcactttggcactatgtgaaaacgagaaaattacaaata
tctggtgacacttcctccttcatgtgtgattcaccccttaggaaagtgtttggagaagac
aagttgaaattttccatggttatgcagaagataacgccccatttgattccacctggtccg
atacacatagagcataaaattaagctttctggttgtagtcccgctggaaatacctgctac
gatgtgcttgttgacgttccttggactttagaaagggaaatgtcaaattttttggccaac
gtagagatgaacaaggagattgaatcttgtgatgatgccatttattctgctataaagaaa
atccatgagcacggccaaaggcgagctttctttcttggatttagtcagtcacctgcagag
ttcatcaattccttaattgcttctcaagctagggatttgaagcttgctgcactagatacc
aaccgtgatgtggagaaagagcggcaagccgagttttacaatcaaccatggattgaagat
gcagttatccggtacctaaatcgcaagactgctgctggcaatgaaactcctggaagcaaa
tag
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