Henckelia pumila: 140882811
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Entry
140882811 CDS
T11037
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
hpum Henckelia pumila
Pathway
hpum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140882811
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Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
140882811
NCBI-ProteinID:
XP_073145119
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All DBs
Position
1:168087828..168093345
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AA seq
1153 aa
AA seq
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MSAEMSASASRETHSENRRNSQAFNQAQSSSGGSHRRQNYNVHNASSMNRVGDSASKAVA
QYTTDARLHAVFEQSGESGKSFDYSQSVKASNQSVSEEQITAYLSKIQRGSLIQPFGCMI
AVDESDFRVIAYSENAREMLGLMPQSVPSLEKLDILSIGTDVRALFTPSSSVLLERAFGA
REITLLNPVWIHSKNLGKPFYAILHRIDVGIVIDLEPARSQDPALSIAGAVQSQKLAVRA
ISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAECKRPDLEPYIGL
HYPATDIPQASRFLFKQNRVRMIADCHATPVKVIQDEALMQPLCLVGSTLRSPHGCHVQY
MANMGSIASLTLAVIINGNDEDGVGGRNSMRLWGLVVGHHTSARCIPFPLRYACEFLMQA
FGLQLNMELQLASQVSEKRVLKTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQ
GKYYPLGITPSEAQIKDIVAWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGIAVACI
TSRDYLFWFRSHTAKEIKWGGAKHHPDDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNSEM
DAIHSLQLILRDSFLHADGSTSKAVVQAQVEDIVVQGMDELSSVAREMVRLIETATAPIF
AVDVEGRINGWNAKVAELTGLSVDEAMGKSLVHDLLLNESKETAEKLLLNALKGEEDKNV
ELRLRTFGSEHLTKAVFVVVNACTSKDHTDNIVGVCFVGQDVTGQRVVMDKFIHIQGDYK
AIVHGPNPLIPPIFALDENTCCSEWNTAMEKLTGWNRRDVMGKMLVGEVFGGFCQLKGPD
SMTKFMIVLHNAIGGQDTDKFPFSFFDRNGNYVQALLTANKRVNMDGHIIGAFCFLQIAS
PELQQSLSMQRLQEKKCDSKMKELAYILHEIKNPLNGLRFTNSLLEATNLTEDQKQLLET
SAACEKQMLKIMKDVDLENIENGSLELEKVEFVLGNVIDAVVSQVMLFFRERGLQLIHDI
PEEVKTLAVYGDQFRIQQVLADFLLNMAWYAPSPEGWVEIQLRPSMKQISDGITTAQIEF
RIVCRGEGLPAELVKDMFHSSRWMTQQGLGLSMCRKILKHMNGEVQYIRESERCYFLIIL
DLPVPRSSLTNTR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagaaatgagtgcgtcagcaagcagggaaacgcattctgagaatagacgcaat
tcccaagcttttaatcaagctcaatcatcgagtgggggtagtcatcgtcgccagaattac
aatgtccataatgcatccagcatgaacagggttggtgattcagcgagtaaagctgtggcg
cagtacacaacggatgcaaggcttcacgctgttttcgagcaatctggtgagtctgggaaa
tcttttgattactcgcagagtgttaaggcttctaatcaatctgtttccgaggagcagatc
actgcttatttgtcgaaaatacagcgcggcagcctcatccaaccttttggctgtatgata
gccgtggatgaatcggattttcgtgtgatagcttactctgagaatgctcgggaaatgctg
ggcttgatgcctcagtcagtccctagtctcgagaagctggacattctttcaattgggact
gatgtaagggccctttttaccccctcgagctcggttttgctagagagggcatttggggcg
cgggagatcacgctattgaatcctgtttggattcactcgaaaaatttagggaagccgttt
tatgcaattttgcataggatagatgttggtattgtaattgatttagagcctgcgaggagt
caggaccccgccctttcgattgcgggtgctgtccagtcacagaagctcgctgtgagggct
atttcccatttgcagtcgctacccggtggggatattaagctgttatgtgacacagttgtt
gagagtgtgagggacctcactggatatgatcgggttatggtctataaatttcacgaggat
gagcatggtgaggttgtggcagagtgtaagaggccggatttggagccgtatattggttta
cattaccctgccacggacattccccaggcttccaggtttttgtttaagcaaaatagggta
agaatgatcgctgactgtcatgccaccccagttaaggtcatccaggatgaggcattgatg
cagcccttgtgtttggtgggttcaacgcttaggtctcctcatggttgccatgttcaatat
atggcaaatatggggtcaattgcatcattgacattggctgttataatcaatggaaatgat
gaagatggtgttggaggaagaaattcaatgaggctgtggggcttagttgttggccatcac
acttcagccagatgcattcctttcccacttcgatatgcctgcgagttcctaatgcaagca
tttgggcttcaactgaatatggaattacaattggcatcgcaagtttctgagaaacgtgtt
ttgaagacacagacattgctgtgtgatatgctacttcgagattcgcccactggaattgtt
acacagagcccaagtatcatggaccttgtcaagtgtgatggggctgcactgtactaccaa
gggaagtattatcctctgggtatcactccttccgaggcacagataaaggatattgtggca
tggctgttggcattccatggggactcaactggtttgagcactgacagtctagctgatgca
gggtatcctggggcagcttctctaggggatgcagtttgtggaatagccgttgcatgcatc
acttcaagggattatttgttctggttccgttcccatactgctaaagagatcaagtggggt
ggagcaaagcatcatcccgatgacaaagacgacggacagaggatgcatccccgctcttca
tttaaggcatttctggaagttgtcaagagccggagtttgccatgggataattcagaaatg
gatgcaattcactcattgcagctaattttaagagattcatttctacatgctgatggaagc
acttccaaggctgttgtgcaggcacaggtggaggacatagtggtacaagggatggatgaa
ctcagttctgttgccagagaaatggttagattaatcgagactgcaacagctcctatattt
gctgttgatgttgaaggccgcattaatggttggaatgcaaaagttgcagagttgacggga
ctatctgttgacgaagcgatgggaaagtccttggttcacgatctcttactcaatgaatca
aaagaaactgctgaaaagcttctgttaaatgctctaaaaggtgaggaagataaaaatgta
gaattacggctgaggacatttggctctgaacatcttacgaaagctgtatttgtggtggtc
aatgcttgcactagcaaggaccatacagataatatagttggtgtatgtttcgtcggtcag
gatgttactgggcagagagtggtgatggacaagttcattcacattcagggtgattacaag
gcaattgtacacggtcccaacccgctaattccgcctatatttgctttggatgagaacacc
tgttgctctgagtggaacactgctatggaaaagcttactgggtggaatagacgggatgta
atggggaagatgctagttggggaagtatttggtggtttctgtcagctcaagggccctgat
tctatgacaaaattcatgattgtcttgcacaacgcaattggaggccaagatactgacaag
ttcccattttctttttttgatagaaatgggaactatgtgcaagctctcttgactgcaaat
aagagggtaaatatggatggtcacattattggagctttttgtttcttgcagattgcaagc
cctgaactgcagcaatctctgagcatgcaaaggctacaggaaaagaagtgcgattcaaag
atgaaagagctggcctatattcttcatgaaataaaaaatccattgaatggtttacgtttc
accaactccctccttgaagccacaaatttaacagaagaccaaaagcagttgcttgagacc
agtgctgcttgtgagaagcaaatgttaaaaataatgaaggatgttgacctggaaaacatt
gagaatggttctctggagctggagaaagtagaatttgtgcttgggaatgtaatagatgct
gttgttagccaagtcatgttgttttttagagaacgaggtttgcaattgatccatgatata
cccgaggaagtcaagacactggcagtatatggcgatcaatttagaattcaacaggtcctt
gctgattttttactaaacatggcgtggtacgcaccatcaccagaaggatgggtagaaatt
caacttagaccaagtatgaagcaaatttctgatggaataaccacagcacaaattgaattc
aggatcgtgtgccgaggtgaaggtcttccagccgaactggtcaaagacatgttccacagc
agtcgatggatgactcagcaaggcctgggccttagcatgtgcagaaaaattttgaagcat
atgaatggtgaagttcaatatatcagagagtccgaaagatgctatttcctcatcattctt
gatctcccagtaccacggagttccttgacaaatacacgctga
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