KEGG   Henckelia pumila: 140882887
Entry
140882887         CDS       T11037                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
hpum  Henckelia pumila
Pathway
hpum03030  DNA replication
hpum03410  Base excision repair
hpum03420  Nucleotide excision repair
hpum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    140882887
   03410 Base excision repair
    140882887
   03420 Nucleotide excision repair
    140882887
   03430 Mismatch repair
    140882887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpum03032]
    140882887
   03036 Chromosome and associated proteins [BR:hpum03036]
    140882887
   03400 DNA repair and recombination proteins [BR:hpum03400]
    140882887
DNA replication proteins [BR:hpum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    140882887
  DNA Replication Termination Factors
   ELG1-RFC complex
    140882887
Chromosome and associated proteins [BR:hpum03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    140882887
DNA repair and recombination proteins [BR:hpum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     140882887
  Check point factors
   HRAD17(Rad24)-RFC complex
    140882887
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Mg_chelatase AAA_lid_RFC1 Rad17 AAA_16 RuvB_N AAA_5 Viral_helicase1 RCF1-5-like_lid nSTAND3 AAA_assoc_2 AAA_25 ResIII AAA_28 AAA_11 AAA_30 AAA_19 AAA_18 DNAX_ATPase_lid ABC_tran IstB_IS21 MeaB bpMoxR RNA_helicase AAA_24 AAA_3 AAA_7 NPHP3_N KTI12 SLFN-g3_helicase NTPase_1
Other DBs
NCBI-GeneID: 140882887
NCBI-ProteinID: XP_073145269
LinkDB
Position
1:complement(105070577..105073559)
AA seq 331 aa
MASSSSSAPGPELPWIEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT
TSMLALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV
KNIIRHVLEGKFDDACAGLKLLYDLGYSPTDIITTLFRIVKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLSLVRETARAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcttcgtcatcttcatcggctccgggccctgaactgccgtggatagagaagtatcgg
ccatccaaggtggcggatatagtcgggaatgaggacgccgtctcccgtctccaagtcatc
gcgcgtgatggcaacatgcccaatctcattctagctggtcctcctggaactggtaaaact
actagtatgttggcgcttgctcatgaacttcttggaccaaattatagagaggcggtttta
gagctaaatgcatctgatgaccgagggattgatgtggtgagaaacaaaataaagatgttt
gcccagaagaaggttacattgccccctgggagacacaaaataataattttggatgaagct
gacagcatgacatctggcgctcaacaagctttgaggaggacgatggaaatatattcaaat
tcaactcgttttgggctcgcttgtaacacatcgtcaaagattatagaacctatccagagt
agatgcgctcttgttcgttttgctagattatctgatcaagagatccttggccgtctgatg
gtggtggttgctgcagaaaaggtaccctatgttccagaaggtcttgaagccattattttc
actgctgatggtgatatgagacaggcattaaataacctgcaagccacaaacagtggattt
ggtttcgtaaatcaagaaaatgttttcaaggtttgtgaccaaccacatcctttgcatgta
aaaaacattatacgccatgtactcgaggggaaatttgatgatgcatgtgctgggctcaag
ctgttatatgatttgggctattctccaactgacataatcactacccttttccgtattgta
aagaactacgatatggcagaatatctaaagttggaattcatgaaagaaactggatttgct
cacatgaggatctgtgacggagttggttcataccttcagttgtgtggtttacttgctaag
ctctcattggtacgtgaaactgccagagcagcttag

DBGET integrated database retrieval system