Henckelia pumila: 140882887
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Entry
140882887 CDS
T11037
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
hpum Henckelia pumila
Pathway
hpum03030
DNA replication
hpum03410
Base excision repair
hpum03420
Nucleotide excision repair
hpum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140882887
03410 Base excision repair
140882887
03420 Nucleotide excision repair
140882887
03430 Mismatch repair
140882887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpum03032
]
140882887
03036 Chromosome and associated proteins [BR:
hpum03036
]
140882887
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140882887
DNA replication proteins [BR:
hpum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140882887
DNA Replication Termination Factors
ELG1-RFC complex
140882887
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140882887
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140882887
Check point factors
HRAD17(Rad24)-RFC complex
140882887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Mg_chelatase
AAA_lid_RFC1
Rad17
AAA_16
RuvB_N
AAA_5
Viral_helicase1
RCF1-5-like_lid
nSTAND3
AAA_assoc_2
AAA_25
ResIII
AAA_28
AAA_11
AAA_30
AAA_19
AAA_18
DNAX_ATPase_lid
ABC_tran
IstB_IS21
MeaB
bpMoxR
RNA_helicase
AAA_24
AAA_3
AAA_7
NPHP3_N
KTI12
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
140882887
NCBI-ProteinID:
XP_073145269
LinkDB
All DBs
Position
1:complement(105070577..105073559)
Genome browser
AA seq
331 aa
AA seq
DB search
MASSSSSAPGPELPWIEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT
TSMLALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV
KNIIRHVLEGKFDDACAGLKLLYDLGYSPTDIITTLFRIVKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLSLVRETARAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcatcttcatcggctccgggccctgaactgccgtggatagagaagtatcgg
ccatccaaggtggcggatatagtcgggaatgaggacgccgtctcccgtctccaagtcatc
gcgcgtgatggcaacatgcccaatctcattctagctggtcctcctggaactggtaaaact
actagtatgttggcgcttgctcatgaacttcttggaccaaattatagagaggcggtttta
gagctaaatgcatctgatgaccgagggattgatgtggtgagaaacaaaataaagatgttt
gcccagaagaaggttacattgccccctgggagacacaaaataataattttggatgaagct
gacagcatgacatctggcgctcaacaagctttgaggaggacgatggaaatatattcaaat
tcaactcgttttgggctcgcttgtaacacatcgtcaaagattatagaacctatccagagt
agatgcgctcttgttcgttttgctagattatctgatcaagagatccttggccgtctgatg
gtggtggttgctgcagaaaaggtaccctatgttccagaaggtcttgaagccattattttc
actgctgatggtgatatgagacaggcattaaataacctgcaagccacaaacagtggattt
ggtttcgtaaatcaagaaaatgttttcaaggtttgtgaccaaccacatcctttgcatgta
aaaaacattatacgccatgtactcgaggggaaatttgatgatgcatgtgctgggctcaag
ctgttatatgatttgggctattctccaactgacataatcactacccttttccgtattgta
aagaactacgatatggcagaatatctaaagttggaattcatgaaagaaactggatttgct
cacatgaggatctgtgacggagttggttcataccttcagttgtgtggtttacttgctaag
ctctcattggtacgtgaaactgccagagcagcttag
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integrated database retrieval system