Henckelia pumila: 140885410
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Entry
140885410 CDS
T11037
Name
(RefSeq) protein argonaute 1A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hpum Henckelia pumila
Brite
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140885410
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140885410
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140885410
microRNA pathway
RISC loading complex
140885410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Clr5
Motif
Other DBs
NCBI-GeneID:
140885410
NCBI-ProteinID:
XP_073148469
LinkDB
All DBs
Position
2:134099298..134107936
Genome browser
AA seq
1064 aa
AA seq
DB search
MVRKRRSDLPGAGETSEPQETGEGRGAVQRPPAQHPMPQQGGYQGGGRGLGQQQRGGYGG
RGGRMPQQQYHGGPPEYQQGRGGQQYQRGPPSQGRGGYIAGRGSGAPPVGEPSRPPAPEL
HQATQSPYQAPMISEPIPHGMPTQGGPSSSSESSDRSALELPEQFQSLSVQSEQPPSQEM
QPASSKAMRFPLRPGKGSYGFKCIVKANHFFAELPDKDLHQYDVSISPEVTSRGVNRAVM
EQLVKLYRESHLGRRLPAYDGRKSLYTAGPLPFTSKEFKITLVDEEDVPGNARRERVFTV
VIKFAARADLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYSPVGRSFYSPDLGRRQ
PLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVSQLLNMDVNARPLSDS
DRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDENGTLKSVVQYFQETY
GFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQERE
SDILQTVHHNAYAEDPYAKEFGIKISEKLAQVEARVLPAPWLKYHDSGREKDCLPEVGQW
NMMNKRMVNGGTVNNWIGINFARSIKDTMVHSFCHELAQMCGISGMAFNPEPVLPVISGR
PDQVERVLKTRFHDVMTKLLPQGKELDLLIVILPDNNGSLYGDLKRICETELGIVSQCCL
QKHVYKMSKQYLANVSLKINVKVGGRNTVLRDAITRRIPLVSDRPTIIFGADVTHPHPGE
DSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPAKGVMHGGMIRELLI
SFRKATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPTVTFVVVQKRH
HTRLFANNHNDRRAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTS
GMAASRGGASASGGARSTRVPGGNAAVRPLPQLRENVKRVMFYC
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagaggcgatctgatcttcctggtgcgggtgagacctccgagcctcaggaa
actggtgaaggacgtggtgcagtccaacgaccaccagcgcagcatccaatgccgcagcaa
ggaggatatcaaggaggaggaagaggccttggtcaacaacaacgaggaggatatggtggt
cgaggtggccgaatgcctcaacagcagtatcatggtgggcctcctgaatatcagcagggt
cggggcggtcagcaatatcaacgagggccaccatctcaaggccgcggtggatatatagct
ggtcgtggttctggggcacctcctgtgggtgagccatctaggccaccagctcccgagctg
caccaagctacccagtctccttatcaagccccaatgatctctgagccgatacctcatgga
atgccgacccagggaggccctagctcctcttctgagtcatctgatcggtctgctttggaa
ctccccgagcaattccagtctctttctgtccagtctgaacagcctccaagtcaagagatg
caaccagcttcaagcaaggccatgaggtttcctctgaggccaggcaagggtagttatggt
ttcaagtgtattgtcaaggccaaccacttctttgctgagcttccagataaggaccttcac
caatatgatgtgtcaatttcacctgaagtcacatcccgtggtgttaatcgtgctgtgatg
gagcagttggtgaagctgtatcgagaatctcaccttggaaggagacttcccgcatatgat
ggaagaaagagtctttacactgctgggcctcttccttttacctcgaaggagttcaaaatc
acgcttgttgatgaagaagatgttccaggcaatgccaggcgagagagggtgtttacagtg
gttatcaagtttgctgcacgcgccgacttgcatcatttgggcatgtttttacagggaagg
caagctgatgcacctcaagaagctcttcaggttctggacattgttcttcgggaattgccc
acgtctcggtattctccagtaggtcgatctttctattcccctgatttaggcagaaggcaa
cctttgggtgaagggctagaaagttggcgtggtttctaccaaagtattcgtcccactcag
atgggattgtcccttaatatagatatgtcatctactgcttttatcgaaccacttccagtg
atagaatttgtcagtcagcttctgaacatggatgttaatgctagaccattgtctgactcc
gaccgtgtgaagataaagaaagcactaagaggagtcaaggtggaagttactcatcgagga
aatatgcgcaggaaataccgcatctctgggttgacatcgcaagcaacacgggagctaaca
tttccggttgatgaaaatggtacgctgaaatccgtggttcaatactttcaagagacttac
ggatttgtcattcagcacactcagtggccttgtcttcaagttggaaatactcagaggcct
aattatttgccgatggaggtgtgtaagattgtagaaggccagcgatattctaagaggttg
aatgagagacagattactgcactgctcaaagtgacgtgccagcgcccccaggagagggag
tctgacattctccagactgtacatcataatgcatatgctgaagacccttatgctaaggag
tttggaattaaaataagtgaaaagctggctcaggttgaggctcgtgttttgcctgctccc
tggctgaaatatcatgattcgggtcgggagaaggattgcctgcctgaagttgggcaatgg
aacatgatgaataagagaatggtgaatggtggcactgttaacaattggatcggcattaac
tttgctcgcagtattaaagacacaatggttcatagtttctgtcacgagcttgctcaaatg
tgcggcatttctggaatggctttcaatcctgaacctgtcttgccagttattagtggtcgt
cctgatcaggtggaaagggttttaaaaactaggtttcatgatgtcatgacaaaactgctt
ccccaagggaaggagcttgacttgctaattgttatattaccagacaataatggttctctt
tatggtgacctgaagcggatatgcgaaacagaacttggtattgtttctcaatgttgtttg
cagaagcatgtgtacaagatgagtaagcaataccttgccaatgtgtctctgaagataaat
gtcaaggttggaggcagaaacactgtattgcgtgacgcaattaccagacgtatacccctt
gtcagtgatcgtcctacaatcatctttggcgcagacgtcactcatccccatccaggagag
gattctagcccatcaattgctgctgttgttgcttcccaggattggccagaagtgacaaaa
tatgctggtttggtatgtgcgcaagcacataggcaagagcttattcaggatttgtataaa
acctggcaggatcctgccaaaggggttatgcatggcggcatgatcagggaactactcatc
tcattccgtaaagcaaccggacagaaaccacagcggatcattttctacagggatggtgtt
agcgaagggcagttctatcaagttttgcttcacgaacttgatgcaatccgcaaggcatgt
gcatctttggagcctaactaccaacctacagtcacctttgttgtggtccagaagcggcac
cataccaggttgtttgccaataaccataatgacagacgggcagttgataggagcggaaac
atactacctggcactgttgttgactcaaagatctgccacccaaccgagtttgacttctat
ctctgtagccatgccgggatacagggtactagtcgcccggctcattaccacgtcctgtgg
gatgaaaacaagtttactgctgatggtcttcaatctctcaccaataacctctgttacaca
tatgcgagatgcacacgctctgtttcaattgtgcctcctgcgtactacgcacatcttgct
gcttttcgggctcgtttctacatggagccagaaacatctgacagcggctctatgactagt
ggtatggccgccagtcgtggtggtgctagtgccagtggtggtgcaaggagtacaagggtt
cccgggggcaatgctgcagtgagacctctgccacagcttagggagaatgtgaaacgggtt
atgttctattgttga
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