Henckelia pumila: 140885923
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Entry
140885923 CDS
T11037
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
hpum Henckelia pumila
Pathway
hpum03030
DNA replication
hpum03420
Nucleotide excision repair
hpum03430
Mismatch repair
hpum03440
Homologous recombination
hpum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140885923
03420 Nucleotide excision repair
140885923
03430 Mismatch repair
140885923
03440 Homologous recombination
140885923
03460 Fanconi anemia pathway
140885923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpum03000
]
140885923
03032 DNA replication proteins [BR:
hpum03032
]
140885923
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140885923
Transcription factors [BR:
hpum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140885923
DNA replication proteins [BR:
hpum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
140885923
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
140885923
MMR (mismatch excision repair)
140885923
DSBR (double strand breaks repair)
HR (homologous recombination)
140885923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
CDC24_OB3
zf-CCHC_2
zf-CCHC_3
CORD_N
Motif
Other DBs
NCBI-GeneID:
140885923
NCBI-ProteinID:
XP_073148662
LinkDB
All DBs
Position
1:complement(107640488..107644065)
Genome browser
AA seq
859 aa
AA seq
DB search
MPPINLTEGAIALLSSGEAQGTDVKPVLQVADIRLVNTQNQNNNNERYRILLSDGEFAQQ
GMLATQRNELVRSEKLQKGSIVQLTQFVCNLIQNRMIIIIIDLDVILEKCDPIGEPKQYP
NKTDGNAPSIARPTAQVQPTNQPVAGSGAQFYASGSAPRPNLGSDIHTPPVMEGRNAGSH
SYNSSIGNPDSSRYGSTNAPPQYAKSESGSGISRAPINYVRPPQSLHHQPPPTFSNRGPV
AKNEAPPRIIPIAALNPYQGRWTIKARVTSKGELKHYSNTRGDGKVFAFDLLDSDGGEIK
VTCFNAVADQFYNQIEPGRVYMISKGSLKPAQKSFNHLRNDHEIYLESTSIVQPCFEDDK
TIPQQQFHFRPVCDIEGLDNNSVVDVIAVVSSISPSTSIMRKNGQETQKRTLQLKDMSGR
SVELTLWGNFCNAEGQTLQNMCDSGVFPVLAVKSGRVNDFNGKSVGTISTSQLFIEPDFL
EAHKLRTWFDNEGKNTTALSISRETNFVRADARKTVSQIKDEKLGTSEKPDWITVSATLT
FMKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQLVDECDYRYILQMQIQDHTG
LTWVTAFQETGEEILGVSAKDLYYLKYEEQDDDKFSELVRNVLFTKFMFKLKVKEETFSD
EQRVKSTVVKADKVNFQTETKYLLDLIAKFKEEDSGSLPLKSEKPISASGMNHGGFGSGT
RESAASAMNYGGSNINVARDTPNQMGMYVNQYSGSRLPPTSSAGMHMSCNSCGASGHSSA
NCPSVMGGPGQQSYGGGFGNTLTPGPSSGGASGECFKCHQFGHWAKDCPNSNNVPPAYGS
SNATPGRYGTASRQYVGGF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgattaatttgacggaaggcgcgattgcgctgctatcgagtggcgaagcgcag
gggacggacgtaaaacccgtgcttcaagtcgccgacatacgcttggtgaacacgcagaac
cagaacaataacaatgaaaggtataggatcctgttgtccgacggagagttcgctcagcaa
ggcatgctcgcgactcaacgaaacgaattggtacggtccgaaaagctgcagaaaggttcc
attgttcagctgacgcagttcgtttgtaatcttattcagaatcgcatgattataatcatt
attgatctggacgtgattctagaaaaatgcgaccctattggtgaaccaaagcaatatcca
aacaagactgacggaaatgcgccttcaattgctagaccgacagcacaggttcagcctaca
aatcagccagttgctggaagtggtgcacaattttatgcttccggttcagctccaaggcca
aatttgggcagtgatattcatacgccacctgtgatggaaggccggaatgcaggctcacac
tcttacaattcttccatcggcaatccggactctagccgatatggttcaacaaatgcacct
ccacagtatgcgaaatcagaatctggttctgggatttctcgggctcctatcaattatgtc
aggccgcctcagtcacttcatcatcaaccacctccaacattctccaacagggggcctgta
gctaaaaatgaagctcctccaagaattattcctattgctgctctgaatccctatcaagga
agatggactattaaggctagagtgacatccaaaggggaactcaagcactacagcaatact
cgaggtgatggtaaagtatttgcatttgatcttcttgattctgatgggggagaaataaaa
gtgacatgcttcaatgccgtggcagatcagttttacaatcaaattgagcctggtagagtt
tatatgatttctaaaggttcgctaaaacctgctcagaaatcttttaatcacctacgtaat
gatcatgagatttatctggagagtacttcaattgtgcagccctgctttgaggatgataaa
accatcccacagcagcaatttcattttcgccccgtatgtgacattgaaggcctagataac
aacagtgtagtggatgtgatcgctgttgtttcttctatcagtccatcaacctcaataatg
aggaaaaatggtcaagaaactcagaaaagaactctccaactcaaggacatgtcaggcaga
agtgttgaattaactttgtggggaaatttttgcaatgctgaaggtcaaacactacagaac
atgtgcgactcgggggtatttcctgttttggcagtgaaatctggtagagtgaatgatttt
aatggaaaatctgtgggaaccatttccactagccagctgtttatagagccagattttctt
gaagctcataaactcagaacatggttcgacaatgaaggaaaaaataccacagctttatct
atatccagggaaacaaattttgtccgggctgatgcgcggaaaactgtatctcagattaaa
gacgaaaaattagggacttctgagaagcctgattggattactgtctctgccactctcacg
ttcatgaaagtggacaacttctgctatactgcatgccccatcatgatcggggatcgtcag
tgcagcaaaaaagttacaaataacggggatgggaaatggagatgcgacagatgtgatcag
ttagttgatgaatgtgattatagatatattctccagatgcaaatccaggatcacactggg
ttgacatgggtgactgcatttcaggaaacaggagaggagatattgggtgtatcagcaaaa
gacctgtattatttgaaatacgaagaacaagatgatgataaattttctgaactggtacgg
aatgttctgtttaccaaattcatgttcaaattaaaagtcaaggaagagacgttcagtgac
gaacagcgtgtcaagtcaacagtcgtcaaagcagataaggtgaatttccaaacagagacc
aaatatcttctagacttgattgctaagttcaaagaagaggactcgggttctttacctctt
aaaagtgaaaaacccatttcagcatccgggatgaatcacggtggatttggtagtggaacc
agagaatcggcagcgtctgctatgaactacggtggaagtaacatcaatgtggccagagac
acaccgaatcagatgggtatgtacgttaatcagtatagtggttcacgacttccccctact
agctctgctggtatgcacatgagttgtaatagctgtggtgctagcggtcatagctctgca
aattgtcctagtgttatgggtggtccagggcaacagtcttatggaggcggctttggcaat
acgttgaccccagggccgagttcaggaggtgcatctggtgagtgctttaaatgccatcaa
tttggacactgggctaaggattgtcccaattcgaacaatgttcctccagcttacgggagc
agtaatgcaactcctggtagatatggtacagcatcaaggcaatatgttggcgggttttga
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