Henckelia pumila: 140886306
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Entry
140886306 CDS
T11037
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
hpum Henckelia pumila
Pathway
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140886306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140886306
Ubiquitin system [BR:
hpum04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
140886306
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
140886306
NCBI-ProteinID:
XP_073148949
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All DBs
Position
3:18971781..18974523
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AA seq
534 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVDNVKTKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaagaccctcacgggcaagactatcactctcgaggttgagagttct
gacaccattgataatgtgaaggccaagattcaggataaagaaggaattccacctgatcag
cagaggctaatctttgccgggaagcagctggaggatggacgaaccctagcggattacaac
atccagaaggagtccaccctccaccttgttcttcgtctccgtggtggaatgcagattttc
gttaaaactctcacaggaaagaccatcacactcgaggtcgagagttctgataccatagac
aacgttaaggccaaaatccaggacaaggaaggtattccacccgaccagcagagattgatt
tttgctgggaagcagctggaggatggacgaactctagcagattacaacatccagaaggag
tccaccctccaccttgttctccgtctccgtggtggaatgcagattttcgttaagactctc
acaggaaagaccatcacactcgaggttgagagttcggataccatagacaacgttaaggca
aaaatccaggacaaggaaggtatcccacctgatcagcagagattgatctttgctgggaag
cagcttgaagatggccgaacccttgctgattacaatattcagaaagaatcgactctgcat
cttgtgcttcggttgagaggaggaatgcagatatttgttaagaccttgactgggaagacc
attaccttagaggtagagagctcagatacaatagacaatgtcaaggcaaaaattcaagat
aaggaaggtatccctccagatcagcaacgtttaattttcgctggcaagcagctcgaggat
ggcaggacgctagccgattataacattcaaaaggagtcgactctccatctggtattgaga
ctcagaggtggaatgcagatatttgtcaagaccttgactggaaaaaccataacattagag
gtcgagagctcagacacgatagacaatgtcaaggctaaaattcaagacaaggagggtatc
cctccagatcagcaacgcttgatttttgctggcaagcagctcgaggacgggaggactctt
gctgattataacattcaaaaggaatcgactctccatctagtgttgagactcagaggcggg
atgcagatatttgtcaagaccttgacaggtaaaaccattacattagaggtcgaaagttct
gacactgtagacaatgtcaaaaccaagattcaggacaaagaaggcatccctccagaccag
cagcgtttgatatttgccggcaaacagcttgaagatggaagaactctagcggattataac
atccagaaggagtcaactcttcatctggtcttgcgtttgaggggtggaatgcagattttc
gtcaagaccttgactggaaaaacaatcacgttggaggttgagagctcggataccattgat
aatgtgaaagctaagattcaagacaaagaaggtatcccaccagatcagcagaggctcatc
tttgctggcaagcagctcgaggatggtcgcacacttgccgactacaacattcaaaaggag
tctactctccacctggtgcttcgtctccgaggtggtgacgtttaa
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