Henckelia pumila: 140886391
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Entry
140886391 CDS
T11037
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpum03036
]
140886391
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hpum04812
]
140886391
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
140886391
Cytoskeleton proteins [BR:
hpum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
140886391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_GCN1
HEAT
HEAT_EF3_N
HEAT_EZ
TPR_CAND1
HEAT_2
HEAT_GCN1_C
Vac14_Fab1_bd
TOR1L1_N
TPR_DNAAF5
HEAT_MROH2B_C
Cnd1
TPR_IMB1
Tti2
UTP20
Adaptin_N
PDS5
Ltn1_1st
HEAT_Maestro
HEAT_DAAF5
MMS19_C
VPS15-like_hel
Sec7-like_HUS
INTS1_R4
TPR_TTI1_C
MMS19_N
TPR_TTI1_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
140886391
NCBI-ProteinID:
XP_073149049
LinkDB
All DBs
Position
3:57360430..57371600
Genome browser
AA seq
1434 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHELLEASRKTYSATEVASLVDVCLDLLKDNNFRVSQG
ALQALDSAAVLSGEHLKLHFNALVPAVVERLGDSKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHKSWRVREEFARTVTSAIGLFVSTELPLQRAILPSILQMLNDTNPGVRESAT
TCIEEMYTQAGTQFLEELHRHHLSTTLLKDINSRLEKIEPKVRSSDAIGSNYPSNETKSA
SFNPKKSSPKSKSSTRGLSLFGADGDITEKPVEPITVYSEKELIREFEKIASTLVPDKDW
SMRIAAMQRVEGLVIGGAVDYPCFHGLLKQLVGPLSTQLSDRRSSIVKQACHLLNFLSKD
LLGDFEGCAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKASRVLPRIVDSAKNDRS
AILRARCCEYALLIVECWADAPEIQRSADLYEDLIRCCVADAMSEVRSTARTCYRMFAKT
WPERSRRLFSSFDPVVQRVLTDEDGGMHRRHASPSIRERSMNMSYTPQSSVPSNIPGYGT
SAIVAMDRSTSISSGISVTSGLLLSQSKSLGKGMDRTLESVLHSSKQKVTAIESMLRGLD
VSGKSRSSSLDLGVDPPSSRDPPFPLAVPASNSQTSSFVDTISGISKGNNRNGGLALSDI
ITQIQTSKDSGKFSYHSSLGSESLSMHSSYPSKRTFEKAPERGFSEEYTEFKDSRRYMNS
HIDRQYFEASHKDDNYRDSHNSHVPHFQRPLLRKNAVGRTPTGRRRSFDDSQLPLGDVSS
YADGPVSLNDALSEGLSSNSDWNARVAAFNYIHSLLQQGTRGIQEIMQYFEKVMKLFFQH
LDDPHHKVAQAALSTLADLIPACRKPFENYLERILPHVFSRLIDPKELVRQPCSTTLDLV
GKTYGTDALLPAFLRSLDEQRSPKAKLAVIEFAIGSFNKHASNSEGSANSGILKLWLAKL
MPLVHDKNTKLKEAAITCIISVYTYFDSIAVINFILSLSVEEQNSLRRALKQHTPRIEVD
LVNFLQSKKEKRGKSSYDPSDLIGTSSEEGYNGASKKSHLLGRYSSGSVDSDGGRKWNSL
QDAQYITGSIGNLKSDDIQENLRHDVLETNSYSEVSPSNCKNLKYASNTDRDKARTCAID
NHSNTEIFSASSLDINRLSGSDFPPKSADYGVDSALSPEFTPNNPKFSVLKLNSSSELGP
SIPRILHLICNGNDESPTAKKRDALQQLVEVSVSNDHTIWSKYFNQILTAVLEVLDDSDP
IVRELTLSLVCEMLKNQKDSMEDSVEIVIEKLLHATKDSVLKVSNESEHCLAIILSQYDP
FRCLSVIVPLLVTEDERILVTCINCLTKLVGRLSQDELMGQLPSFLPALFDAFGSQSADV
RKTVVFCLVDIYIMLGKPFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDGNQ
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcattggagttggcgcgtgcgaaggacaccaaggagaggatggctggcgtc
gagcgtctccacgaactactcgaagcatcgaggaagacttattcggcgacggaggtggcg
tcgcttgtcgacgtatgcttagatctcttgaaggacaacaatttcagagtgtctcagggt
gctctgcaggcactagactcagctgccgtgctctccggcgagcacttgaagcttcacttt
aatgctcttgtacccgctgtggtcgagagattgggcgattccaagcagcctgttagggat
gctgcgaggaggcttttgcttactctcatggaggtgtcttcccctacaatcattgttgaa
agagctggatcttatgcttggactcacaaaagctggagagttagagaagagtttgctcgt
actgtcacatctgcgatcggtctctttgtgtctacagaacttccccttcaacgtgctatt
cttccatctattttgcaaatgttgaatgatacaaatcctggtgtaagagaatcggccaca
acttgtatcgaggagatgtatactcaggctgggacacagtttcttgaggaacttcacagg
catcatttatctacaacattgttaaaagatattaattccagattagaaaaaattgagccg
aaggttcgctcttcagatgcaatcggtagcaattacccttctaatgagactaagtcagct
agctttaatccgaaaaaaagcagtccgaagtccaaaagctcaactcgtgggctttctcta
tttggagctgatggagatatcaccgagaaacctgttgaaccaattacagtgtattcagaa
aaggagctcatcagggagtttgagaagattgcttcgacccttgtgccggataaagattgg
tcaatgaggattgcagccatgcagagagttgaaggtcttgtaattggaggtgcagtcgat
tacccttgtttccatggacttctcaagcaattggttggtcctttgagcacacaattatct
gataggcgatctagcattgtgaagcaggcctgccatttattaaacttcttatcaaaagat
ctcttgggagactttgagggatgtgccgaggtttttattccggtccttttcaagcttgtt
gtgataacagtgcttgttattgccgaatctgcagataactgtattaaaacgatgttgcgc
aattgcaaagcttcgcgtgtgcttcctcggatagttgactctgcaaagaatgaccgcagt
gctatacttcgtgcgaggtgttgcgaatatgcgcttctaatcgttgaatgttgggctgat
gctcccgaaatacaacgatcggctgacctctatgaagacctcatcagatgttgtgttgct
gatgcaatgagtgaggtgcgatctactgccaggacctgttatagaatgtttgctaaaacc
tggcctgagcgctcacggcggttgttttcgtcttttgatccggtagttcaaagggtgttg
actgatgaggatggtggaatgcacagaaggcatgcttctccttccattcgcgaaaggagt
atgaacatgtcctacactcctcagtcgtccgtcccttcgaacattcctggttatgggact
tctgccatagttgcaatggatagaagtacaagtatatcttcagggatatcagttacatcc
ggattactgctctcacaatcaaagtctctgggtaaaggaatggaccgtacgcttgaaagt
gtgctgcactcgagcaagcagaaggtcactgctatagaaagtatgttgaggggcttggat
gtatcaggcaaaagcagatcctctagtttggacttaggagttgacccgccatcgtctcgt
gatccaccatttccccttgctgttccagcttcaaatagtcaaacaagttcttttgtagac
acaatttctggtatttctaaaggtaataatcgcaatgggggtttggcgttgtcagatatc
atcactcaaattcagacttctaaagattcgggtaaattttcatatcatagtagcttggga
agtgaatctttgtctatgcattcatcttacccatccaagagaacatttgaaaaggcaccg
gaaagaggttttagtgaagaatatacagaatttaaggattcgagaagatatatgaattcc
catattgataggcaatactttgaggcatctcataaagatgacaattatagggattcccat
aatagccatgtaccacattttcagcgtccacttttaaggaagaatgcagttggacggacg
cccacagggaggagaaggagctttgatgacagccagctaccactgggagatgtctcaagt
tatgcagatggtccagtttcccttaatgatgctctaagcgagggtcttagttctaattca
gattggaatgctcgggtcgctgcatttaattatatccactctctgctacagcagggcacg
agaggcattcaagaaataatgcagtattttgagaaggtcatgaagctatttttccaacat
ttggatgatccccatcataaagtcgcacaagccgccctttcaacacttgccgatcttatt
ccagcatgccgaaagccatttgaaaattacttggagaggattctaccccatgttttctca
cggctgattgatccaaaggaattagttaggcaaccttgctcaactacattagatcttgtg
ggcaaaacatatggtactgatgcacttctgccagcttttctccgatcattggatgaacaa
cgctctccaaaggcaaaattagctgtaattgagtttgctattggttcatttaacaagcat
gcatcgaattctgaaggctctgcaaatagtggcatccttaagttatggcttgcaaaatta
atgcccctggttcatgacaaaaataccaaactgaaagaagctgccatcacatgtataata
tctgtttatacgtattttgattcaatagcagtgataaattttatccttagcttatccgtc
gaagaacagaattctttgagacgagccctcaagcagcatactcctcgcattgaagtagac
ctggtgaattttctgcaaagtaagaaagagaaacgtggcaagtcctcttacgatccatct
gatctgattggaacttcttctgaagaggggtacaatggagcatcaaagaagagtcatcta
ttaggaaggtattcttctggttctgttgatagcgatggtggtaggaagtggaattctctt
caagatgcacagtacatcacaggatctattggcaacttaaaatctgatgatattcaagag
aacttgcgtcatgatgttctggaaactaattcgtattctgaagtctccccttcaaattgc
aaaaatttgaaatatgcctctaacacggaccgtgataaagctagaacttgcgcaatagac
aaccattcaaatactgagattttttcagcttcatccttggatatcaatcgacttagcgga
tcggattttccgccaaagtctgcggattatggggttgatagtgctctttcacctgaattt
acaccgaataatcctaagttttcggttttaaaactgaattcttcctcagaactgggacca
agcattccccggatccttcatttgatttgtaatggcaatgatgaaagtcctacagcaaag
aagcgtgatgcacttcaacagttggttgaagtatctgtatcaaatgaccacactatttgg
agcaagtacttcaatcagattttgactgctgtacttgaagtgctggatgattctgatcca
attgtacgcgagttgactctctctcttgtttgtgaaatgttgaagaatcagaaagattct
atggaggattctgtcgagattgttattgaaaagctgcttcatgcaacaaaagacagtgtt
ctgaaagtatcaaatgaatcggagcattgtttggctataattctgtctcagtatgatcca
tttaggtgtttaagtgttattgttcctttgctcgttaccgaagatgagagaattcttgtt
acatgcattaactgtttgacaaagcttgttggtaggctctcccaggatgaacttatgggt
caacttccatcatttttgccagctcttttcgatgcatttgggagccagagtgcagatgtc
cgcaagactgttgttttctgtttggtggacatatacatcatgcttgggaaaccatttttg
ccgtacttggaggggctcaacagcacacaactacgacttgtaaccatttacgcgaaccgg
atatcgcaggcgagaactggcactcctattgatggtaaccaatga
DBGET
integrated database retrieval system
