Henckelia pumila: 140886677
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Entry
140886677 CDS
T11037
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
hpum Henckelia pumila
Pathway
hpum03420
Nucleotide excision repair
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140886677
09124 Replication and repair
03420 Nucleotide excision repair
140886677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140886677
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140886677
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140886677
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
140886677
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
140886677
TCR (transcription coupled repair) factors
Cul4-CSA complex
140886677
Exosome [BR:
hpum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140886677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ORC5_lid
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
140886677
NCBI-ProteinID:
XP_073149496
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All DBs
Position
3:198624684..198632139
Genome browser
AA seq
838 aa
AA seq
DB search
MSQPTASTSASAKVCKRSSPYSSSPTTTAVGGGAASIFPAMKKAKSQAVASSIEGNKNGQ
QQITPHVHFSESTMIENDPNDVVLEASAASGAFGGRAGAGGGGITANLARKKATPPQPTK
KLVIKLVKAKPTLPTNFEENTWATLKSAISAIFLKRPDPCDLEKLYQAVNDLCLHKMGGS
LYQRIEKECEAFINAALQSLVGQSEDLVVFLSLVEKCWQDFCDQMLMIRGIALYLDRTYV
KQTPNVCSLWDMGLQLFRKHLNLSSEVEHKTVFGLLKMIESERLGEAVERTLLNHLLKML
TALGIYPESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEMRLQEEHERCLLYVDAS
TRKPLVATAERQLLERHISAILDKGFVMLMDGKRIEDLQRMYLLFSRVNALESLRQSLNQ
YIRRAGQTIVIDEEKDKDMVSCLLEFKANLDMIWEESFSKNEAFSNTIKDAFEHLINLRQ
NRPAELIAKFVDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLL
LGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGI
EMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQISLGHCVLKAE
FPKGRKELSVSLFQTVVLMLFNDAENLSFQDIKESTGIEDKELRRTLQSLACGKFRVLQK
IPKGRDVEDDDSFVFNDQFTAPLYRIKVNAIQMKETVEENASTTERVFQDRQYQVDAAIV
RIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcccaccgcttccacttccgcctccgctaaagtctgtaaacgctcatctcca
tattcttcctctcccaccaccaccgctgtaggcggcggcgcagcttctattttcccagca
atgaagaaggccaagtcacaggctgttgcatcatcaattgaaggtaacaagaacggacag
cagcagattactcctcacgtgcacttctctgaatccacaatgatcgaaaatgatcccaac
gacgttgtattggaggcatctgcggcttccggagcttttggtggccgcgctggcgctggc
ggaggaggaatcacagctaatcttgctaggaaaaaggccacgcctccgcaacctacgaaa
aagcttgtgattaagctcgttaaagctaaaccgacactgccgactaatttcgaagaaaat
acatgggccacgctcaaatcagctataagtgccatatttttgaaacgaccagatccttgt
gacttagagaagctatatcaggctgtcaatgacctttgcctgcacaagatgggggggagt
ctttatcagcgaattgaaaaggagtgtgaagctttcattaatgccgctctacaatctttg
gttggtcaaagtgaagatttggtcgtttttctgtcactagttgagaaatgttggcaggat
ttttgtgatcaaatgctgatgatccgtggaatagctctatatcttgatagaacatatgtg
aagcagacaccgaatgtgtgttcattgtgggacatgggtttgcagcttttccgcaaacat
cttaatctatcttcagaagtcgagcacaaaactgtatttggtttgttaaaaatgattgag
agtgaaagattgggtgaagcagttgaaagaactctccttaatcatctgttgaagatgtta
actgcactggggatttacccagaaagttttgagaagccatttcttgaatgtacatccgag
ttttatgctgctgaaggagtcaaatacatgcagcagtcggatgttccggattatttaaag
cacgtcgagatgaggttgcaagaagaacatgaaagatgcctactttatgtagatgcaagt
accaggaagccattggtagctacagcagaaaggcaactacttgaacgtcacatatctgca
attcttgataagggtttcgtgatgctgatggatgggaagcgtattgaagatcttcaaaga
atgtatttacttttttccagggttaatgcccttgaatcattaaggcaatctcttaatcaa
tacatccgaagagcaggccaaaccattgtcattgacgaagagaaggacaaagatatggtt
tcctgcttactggaatttaaggcgaaccttgatatgatatgggaagaaagtttctctaaa
aatgaggcatttagcaatacaataaaggatgcatttgagcatctcattaatctccgtcag
aatcggcctgctgagttaattgccaagttcgtggatgagaagctccgtgctggaaataag
ggtacatcagaggaagagttggagggtacacttgacaaagtcttggttttgttcagattt
atacagggtaaagacgtattcgaagcattctataaaaaggatcttgctaaaaggctcttg
ttgggtaagagcgcatctattgacgccgagaagtccatgattaccaagttgaaaacagag
tgtggcagtcagttcactaacaaacttgaaggaatgttcaaggatattgaattgtcaaag
gaaattaatgaatcattcaagcaatcatcccaagctcggacaaaacttccctctggaatc
gagatgagtgtccacgtcttgacaacagggtactggccaacctatccacccatggatgtc
aggctgccccatgaactcaatgtttatcaggatatatttaaggagttttatttgagcaag
tacagtggaaggcggctaatgtggcaaatttcattgggtcattgtgtactaaaagcagaa
tttcctaaaggtagaaaggagctgtcagtttctctatttcagactgttgtcttgatgctc
tttaatgatgccgaaaaccttagctttcaagatatcaaggaatccacgggtattgaagat
aaagagctgcgaagaactttgcagtcccttgcatgcggaaaatttcgtgttcttcagaaa
atccccaaagggagagatgtggaagatgatgactcctttgttttcaacgatcaatttact
gcacctctgtatcgtatcaaggtaaatgccattcagatgaaggagactgtagaggagaat
gccagtacgacggaacgagtcttccaagaccgtcaatatcaggttgatgccgctattgtt
cggattatgaagacaagaaaagttttaagccacactctcctgataactgaactctttcaa
cagctcaagtttcccataaaacctgccgacctgaagaaaaggatcgaaagtctcattgac
agagaatacctggagcgcgacaaaaacaacccgcaagtgtacaactaccttgcgtaa
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