Henckelia pumila: 140886721
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Entry
140886721 CDS
T11037
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140886721
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140886721
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
90S particles
Helicases
140886721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_N
HA2_C
DEAD
AAA_22
ATPase
nSTAND3
WAPL
Motif
Other DBs
NCBI-GeneID:
140886721
NCBI-ProteinID:
XP_073149563
LinkDB
All DBs
Position
3:144101155..144109868
Genome browser
AA seq
1321 aa
AA seq
DB search
MPQPANLVVGTDLMRAECDGGDIIMLPGNKKKEKRVKNQVSNRRMNKPKELSKSQKRKLK
KLEEDKEKEKLLAKSIDTLERYKIRDDVYSLMWSSRNLGQVETVLEKRRREANFLKAGLE
LPVSDRPLKKRTSDDSSSHVKQCENILMSLPTNDQNNLKQSIAEKEAMHDAIDSAKKVVN
ETIEPSRTELSQKPVSSCYNHEEIMKPELKPVDTLHGDPKNSLDGPSNHGDYCFVKNLTT
PTVVHVSRPKEVETTRRDLPIVMMEQEIMEAINYHSSVIICGETGCGKTTQVPQFLYEAG
FGPNHVHTRRGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRIGDNCSIKF
MTDGILLREVQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIKERQREFEEQQKRII
SGETIEFENRIYPLKLVLMSATLRVEDFVSERRLFHDPPPIIEVPTRQYPVTIHFSKRTE
IVDYIGQAFKKVMSIHKKLPPGGILVFVTGQREVEYLCQKLRRASRAISENNVRGNTETL
SVHEEKPSEEIDMKEITDAFDCQGGFGDDALDHFSVHMEENHGMLLEDDYDDTYNSSEDS
DLEFYSDDENYSKLVSAESDGKLVDILGADGGIDSLKAAFEALAGNNGTLPDNTIQDVTK
TLEGGPNQPSSIAEKSVEDKGFCTSPLRVLPLYAMLPAPAQLRVFEEVKEGERLVVVATN
VAETSLTIPGIRYVVDTGREKVKTYNSSNGMESYEIQWISKASAAQRAGRSGRTGPGHCY
RLYSSAVFNNMFLDFSSAEILKVPVDGVVLLMKSMHIGKVANFPFPTPPETNALIEAENC
LKVLEALDSKGRLTPVGRAMAHYPMNPRHSRMLLTVIQTMQRVKDSSRASIVLGYAVAAA
AALSLSNPFITQFEGNHNDTDDSKHAEKDGSVEGENIHDKGEKARRKKFKEIVKASHEKF
CNPTSDALTIARALQCFELSENPVEFCGDSALHYKTMEEMSKLRKQVLQLVFSSSARDLQ
QDFLWTHGTLKDVECSWKLSSNKHHLLLNEEDILAQAICAGWADRVARRIKATSVMLDGG
KKVKSVRYQACMVKETVFLHRWSSVSKSPPEFLVYNELLYSKRPYIHGATSVRSNWLLKY
AQPLCSFSAPLSDPKPYYDPIADQVLSWVTPTFGPHLWQLPLHSLPIKDNFNRVAVFACS
LLEGQVLPCLKAVRKYLVVSPSSILKPEARGLKRVGNLLSKMNWRGRVIDRCTKLRDLWN
ENPAELFPEIRDLFQGGFHMQFEELWVEMLHQVNLDQEERFPIRAKGEKRKKVGLPVALK
D
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagcctgctaatctggtcgtgggaacagatttgatgagggcggaatgtgatggt
ggggatattatcatgttaccaggaaataaaaagaaagaaaagagggtgaaaaatcaggtt
tccaaccgcagaatgaataagcccaaggagctaagcaaatcccagaaaagaaagttaaag
aagctcgaggaggacaaagagaaggaaaagcttctcgcaaaaagcattgatactttggag
aggtataagattcgagatgatgtttattcccttatgtggtcttcacggaacttgggtcag
gttgaaacggttcttgaaaaacgtaggagggaagccaactttcttaaagcaggtttagaa
ttgccagttagtgatcgaccattaaagaagagaaccagtgatgattcatcttctcatgtt
aaacaatgtgagaatattttaatgtcactaccaaccaatgaccaaaacaatttgaagcag
tcaatagcggaaaaggaggcgatgcatgatgctattgattcagccaagaaagtggttaat
gagactattgaaccatcaaggacagaactgtcgcaaaaacctgtttcttcatgttacaac
catgaagaaattatgaagcctgagttaaagcccgtggatacactgcatggggatccaaaa
aacagtcttgatggtccaagtaatcacggcgactattgttttgtaaaaaatctcactact
ccaactgtggtgcatgtgtcaaggccaaaggaggtggaaacgacaagaagggatcttcct
attgtcatgatggaacaagaaataatggaagctattaattatcacagtagtgttattata
tgtggtgagactggttgtggtaagaccacccaagttccccagtttctttacgaggctggt
tttggcccaaaccatgtgcatactcgtcggggaattattggcgtcacccaacctcgccga
gtcgcagtgcttgctactgctaagcgtgtggcttttgagcttggtcttcgcttgggtaag
gaagtaggttttcaagtcagacatgacagaaggattggagataattgctcaatcaagttc
atgacagatggaatcttgcttcgagaagtgcagaatgattttctattgaagcgctactct
gttataattttggatgaggcacatgagagaagtttgaatacagatatactcatcgggatg
ctttctcgagttatcaaagagcgtcaaagggaatttgaggaacaacagaagagaattatt
tctggggaaactattgaatttgaaaataggatatatccattgaaacttgttctaatgagt
gcaacactgcgggtagaagattttgtgtctgagagaagactttttcacgaccccccacct
attattgaagttccaactcgacagtatccagtcaccatacatttctcaaaaagaacagag
attgtagattatattggtcaagcgttcaaaaaagttatgtcaattcacaagaaactgcca
cctggtggcattcttgtttttgtgacaggacagagagaagtagaatacctttgtcagaag
ttacgcagggcttctcgggcaatatcagaaaataatgtgagaggaaataccgagacactt
tctgtacatgaagagaaaccttcagaagaaattgatatgaaagagatcactgatgctttt
gattgtcaaggaggttttggtgatgacgcactcgatcattttagtgttcacatggaggag
aatcatggcatgttattggaagatgactatgatgacacctataattcaagtgaagatagt
gatctggaattttatagcgatgatgagaattattcaaaattggtgtctgctgagtctgat
ggtaagcttgtggatattttgggagcggacggaggcattgattctttgaaggctgctttt
gaagccttggccgggaataatggtactttgccggacaatacaatccaagatgttaccaaa
acacttgaaggaggcccaaaccaaccaagttccattgctgagaaaagtgtggaggacaag
ggtttttgcaccagtccacttcgggttctgcccctttatgccatgcttcctgcaccagcc
cagcttcgtgtatttgaagaggtaaaggaaggagagcgtcttgttgttgttgcgactaat
gtggctgagacctctttgaccattcctggaataaggtatgttgttgacactggaagggag
aaggtcaaaacttacaactcttccaatggtatggaaagttatgagatacagtggataagt
aaggcttctgcagcccagcgtgctgggagatctggaagaactggacctggacattgttat
cgcctatattcttcggcagtcttcaataatatgtttttggacttctcaagtgctgaaata
ttaaaagttccagttgatggtgttgtcctccttatgaaatccatgcatattggcaaggtt
gctaattttcctttccctacacctccggagaccaatgctttgattgaagcagagaattgt
ttgaaggttcttgaggcacttgattccaagggaagattgacccctgtagggagagccatg
gctcactatcccatgaatcctcgtcattccagaatgctcctgactgttattcaaactatg
cagagggtgaaagatagtagtcgagcaagtatagttttgggctatgcagttgcagcagct
gcagctttgagcttgtcaaatcctttcatcacgcagtttgaaggaaaccataatgataca
gatgattcaaagcatgccgagaaagatggttctgtagaaggtgagaacatccatgacaaa
ggagaaaaggcaaggagaaagaaattcaaagaaattgtcaaagcttctcatgaaaagttt
tgtaacccaacaagcgatgctttgaccattgctcgtgcacttcagtgttttgaactttct
gaaaaccctgttgagttctgcggtgatagtgctttacactataaaaccatggaagaaatg
tccaagctgagaaaacaggttcttcaattagttttcagctcaagtgcgcgtgatttgcag
caagactttttgtggactcatggtaccctcaaggacgtggaatgttcttggaaactttcc
tcaaataaacatcatcttttgctgaatgaggaggacatcttggctcaggctatttgtgct
ggttgggctgatagggttgctaggcgcattaaagcaacttccgttatgctagatggagga
aaaaaagttaaatcagtaaggtatcaagcttgcatggtcaaagaaacagttttcctccat
cgttggtcatctgtttctaaatctccccccgaatttttggtttacaacgagttattgtat
agtaaacgaccatatattcacggtgctacaagcgtgaggtcaaattggcttcttaagtat
gcccagccactgtgtagtttctctgcacccctttctgatccaaaaccttattatgaccca
atagctgatcaggtcttgtcttgggtgactcctaccttcggtccccatctgtggcagctt
cctctgcatagtttgcccatcaaagacaattttaatcgagtggcggtatttgcttgttct
ctactcgaagggcaagttcttccatgcctaaaagctgtccgtaaatacttagtagtctca
ccttcaagcattttgaaaccagaagcccggggcctcaaacgggtgggcaatttgttaagc
aaaatgaattggagaggaagagtcattgaccgttgtactaaattaagggatttgtggaat
gaaaatccggcagagttgtttcctgaaattagagatttatttcagggaggatttcatatg
cagtttgaagaactttgggttgagatgctccatcaggttaacttagatcaggaagaaaga
ttccctattagggccaagggggagaaaaggaagaaagttggacttccagtggcactcaaa
gattga
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