Henckelia pumila: 140886835
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Entry
140886835 CDS
T11037
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
hpum Henckelia pumila
Pathway
hpum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140886835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
140886835
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
140886835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
DZR_2
DZR
WHD_Rad26_CSB
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
140886835
NCBI-ProteinID:
XP_073149810
LinkDB
All DBs
Position
3:195685261..195689408
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AA seq
535 aa
AA seq
DB search
MPIDLILKPSCGSCGSSVELYGSTCKHLTLCVTCGKTMAENRAKCYECGTTITRLIREYN
VRASSSSYKSYFIGRFATGVPNFKKKHDNKWSLQKEGLQGRQVTDALREKYKNKPWLLED
ETGQFQYHGHLEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
RRKTADGYERWMMKAANNGPAAFGEVEKFDERESGSGGVRGRKRTPGDDHEGNASDKGEE
DEEDEAARKSSLGLNKKNGDDDDEGPRGGDLDFDDDDIEKGDDWEHDEIFTDDDEAVGND
PEEREDLAPEIPAPPEIKQDDEDEDEADEEEGKLSKSGKELKKLLGRANGLDDSDAEDDD
DDEDDMEDDVSPVLAPKTEPPNEKPAEHSAPPKATTSGSSRGTPSTSKSSKGKRKFGVEE
SRATNGAPLKKVKTENEVKSVKDEISPSTKSSALLKGASPPVSIKTAPATPSGPVTEGEI
RRVLAQKTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccaatagatttgatactgaagccatcatgcggcagttgtggttcctcggtcgagctt
tatggaagcacgtgcaagcacctgacgctttgcgtgacgtgcggcaaaaccatggcggag
aatcgagccaaatgctatgagtgcggaacaaccatcactcgtttgatcagggaatacaat
gtccgggcaagttccagtagctacaaaagttacttcattggaagatttgcaacaggagta
ccgaattttaagaagaagcatgataataaatggtcattacagaaagaaggtctgcagggt
cgccaagttactgatgccttacgcgagaagtacaagaataaaccttggctgctggaagat
gagacaggccagtttcaataccatggtcaccttgagggttcacagtcagcaacatattac
cttctgatgcttcaggggaaggaatttgttgccattcctgctggttcatggtacaatttt
aacaaagtggcacaatataagcaactcactttggaggaagccgaagaaaagatgaaaaat
agaaggaaaactgctgatggttacgaaagatggatgatgaaagcagcaaacaatggacct
gctgcatttggtgaagttgaaaagtttgatgaacgtgaaagtggatctggtggtgtgaga
gggcgtaaaagaaccccaggtgatgatcatgagggcaatgcctcagataagggagaggag
gacgaggaagatgaggcagcaagaaaaagtagtctaggacttaacaagaaaaatggggat
gatgatgatgaaggccctagaggaggtgacctggactttgacgatgacgatattgaaaag
ggcgatgattgggagcatgacgaaatttttacagatgatgatgaagcagttggcaatgat
ccagaggaacgggaagatctggctcctgaaatacctgctcctccagaaattaagcaggat
gatgaggacgaggatgaagctgatgaagaggaggggaagctgagcaaatctggaaaagag
ctgaagaaacttctggggcgagctaatgggctggatgattcagatgcagaggatgatgat
gacgatgaggatgatatggaagatgatgtttctccagtacttgcaccgaagacggaacct
ccaaatgaaaagccagccgagcacagtgcgccaccgaaggccacgacttcaggatctagt
cgtgggacaccatctacgtcaaagtcttcaaagggaaaaagaaaatttggtgtggaggaa
tcaagagcaactaatggagcacctttaaagaaggtaaaaacagaaaatgaagtaaaatcc
gtgaaagatgagatttctccgtctacaaagagcagtgcactgctgaaaggcgcatcaccg
ccagtatcgataaaaactgcgccagcaacaccttccggacccgtgaccgagggagaaata
aggcgtgttctagcgcagaagacaccagtgaccacgcaggatctcgtagccaagtttaaa
tctaggttgaagctcaaagaggacaaggatgcttttgctgctatattaaggagaatatca
aagatacaaaagaccaatggtgccaactatgtagttcttagagaataa
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integrated database retrieval system
