Henckelia pumila: 140887148
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Entry
140887148 CDS
T11037
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hpum Henckelia pumila
Pathway
hpum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140887148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140887148
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140887148
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
140887148
NCBI-ProteinID:
XP_073150315
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Position
3:59716605..59720170
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLNTDRDRNAVSLVCKSWYEIERWCRRRIFIGNCYAVAPDVVIRR
FPEVRALEMKGKPHFADFNLVPEGWGAYFYPWVAAMSVAYPFLEEIKLKRMVVTDDCLEL
ISKSFKNFKVLVLSSCEGFSTDGLASIAASCRNLSELDLRESEVEDPSGHWLSHFPKNCT
SLVSLNMSCLHSEVNFSTLERLVARSPNLKTLRLNRAVALEKLPNLLRHAPQLVELGTGV
YSAEIRSDVFCNLREAFSSCKNIKGLSGFWDVVPAYLPAIYSTCSGITTLNLSYATVQSS
DLLKLVSHCRNLRRLWVLDYIEDSGLDALASSCKDLQELRVFPSDPFGGEPNVSLTEKGL
VSVSEGCPKLQSVLYFCRQMSNAALVAIARNRPKMIRFRLCIIEPQTPDYLTHEPLDTGF
GAIVENCKELRRLSMSGLLTDRVFEYIGTHAKKLEMLSIAFAGESDLGLHHILSGCDSLR
KLEIRDCPFGDKALLANASKLETMRSLWMSSCLVSFGACKLLGQKMPKLNVEVIDERGPP
DSRPETSPVEKLYIYRTVAGRRFDMPGFVWTMDLHSESGFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactctttcccggaggaggttctggagcacgtattctcgttcctgaacaccgac
agagatcggaacgcggtttcgttggtgtgcaagtcgtggtacgagatcgagcggtggtgt
cgccgccgtattttcatagggaactgctacgccgtagctccggatgtggtgatccggagg
tttccggaggtcagagcgctggagatgaaggggaagccgcatttcgcggatttcaacctt
gtgccggagggttggggtgcgtacttctatccttgggtggcggcgatgtctgtggcctat
ccgtttctcgaggagatcaagctgaagcgtatggtggtgacggatgactgtttggagctg
atctcgaaatcgtttaagaatttcaaagtcttggtgctctcgtcgtgtgaggggttttcg
actgacggtctcgcttcgattgcagctagctgcagaaatctcagtgaacttgatctgagg
gaaagcgaagtagaggacccgagtggacattggctcagtcattttcctaaaaactgcacc
tcactggtgtctcttaacatgtcttgcttacactctgaggttaatttctccaccttggag
cgtttggttgcacggtcacctaatctaaagacactacggttgaatcgtgctgtagccctt
gagaagcttcccaatctacttcgccacgctcctcaattggttgaattgggcacgggcgtc
tattcagctgaaatacggtctgatgtcttttgcaacttgagagaggcattttcctcttgt
aagaatattaaaggcttgtctggattttgggatgtggtaccagcttatctcccagctata
tattccacctgctctggaataacaactctgaatttaagttatgcaacagttcaaagttct
gatcttctcaagcttgtcagccattgccgaaatttaaggcgtctatgggttctggattac
attgaagacagtggccttgatgcccttgcctcatcttgcaaggatttgcaggaacttcgg
gtgttcccttcagatccttttgggggagaacctaatgtatctttgacagaaaaggggctt
gtctctgtctccgaaggctgcccgaagcttcaatctgttctttacttctgtcgccagatg
tcgaatgctgcattagttgctatagcaagaaatcgtcccaagatgatacgcttccgattg
tgtataatcgagcctcaaactcctgattacttgacccatgaaccccttgataccggtttt
ggagccattgtggaaaactgcaaggaattgcgacgcctttccatgtccggcctccttaca
gatcgagttttcgaatatattggaacccatgccaagaaattagagatgctttctatagct
tttgctggggagagtgacttgggcctccatcatatattgtcagggtgtgacagcctccgg
aaactggagatccgagactgtccatttggggacaaggcacttttggccaatgcctccaag
ctggagacaatgcgatccctttggatgtcttcttgcttggtgagttttggagcgtgcaag
cttctaggtcaaaagatgccaaagctcaatgtcgaagttatagatgaaagaggtccccct
gattcaagacccgaaaccagccctgtcgagaaactctacatataccggactgttgccgga
agaagattcgacatgcctggtttcgtttggacaatggaccttcattcagagtcggggttc
tcttga
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