Henckelia pumila: 140887223
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Entry
140887223 CDS
T11037
Name
(RefSeq) vacuolar protein sorting-associated protein 35A isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hpum Henckelia pumila
Pathway
hpum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140887223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140887223
Membrane trafficking [BR:
hpum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140887223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
140887223
NCBI-ProteinID:
XP_073150434
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Position
3:180965264..180975205
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AA seq
790 aa
AA seq
DB search
MMITDGVEDEDKWLTAGIAGIQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEIFFKEETSRGCSMVELYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDSDTVIDAVEFV
LQNFTEMNKLWVRMQYQGPTREREKREKERSELRDLVGKNLHVLGQIEGVDLEMYKETVL
PRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLNACPQLQSSVDVKTVLARLM
ERLSNYAASGAEVLPELFQVEAFAKLNNAIDKVIAAQDNMPIVGVVTLYASLLTFTLQVH
PDRLDYVDQILGACVKKLSGKERLDDNKATKQIISLLSAPLEKYKDIDTVLKLSNYPLVI
EFLNGQTNKEMANVIVQNIMKNRTCISTAEKVDALFELIKGLIRDLNDLHDELDEEDFKE
EQSFVARLIQMMYSDDPEEMLKIICAVKKHILTGGAKRLPFTIPPLIFSTLKLIRRLESQ
DDSVSKEDDSAMPKKLFQIVTQTIEALCSVPVPELALGLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEITDSKAQVTTIHLIIGTLQRMHVFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDENDSIRDGERVLLCLKRAQRIANAAQQMSNATRGSSGSVLLYIEILN
KYLYFYEKGVPQITADLIQGLIELITSTTGGENTPPDPAADAFLASTVRYIQFQKNKGGA
VAEKYEHIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgattacggacggagttgaagatgaagacaaatggctaactgctgggatcgccggc
attcagcagaatgctttctacatgcatcgcgctcttgattccaacaatctgaaggatgct
ctcaagtattcagctcagatgctgtccgagcttcgcacttctaggctttcccctcacaag
tactatgagctttatatgagggcatttgatgagttgaggaaattagagatcttcttcaag
gaggagacaagtcgtggctgctcaatggttgagctgtatgagctcgtccagcacgccggc
aacattttgcctagactgtacttgctctgtactgtcggttctgtttacataaaatccaaa
gaagctcctgctaaggatattctcaaagatctcgtagaaatgtgtcgcggcatccagaac
cctgttcgtgggctctttcttaggagttatctctctcaagtcagtaaagacaaattacct
gatattggttctgaatatgaaggagattccgatacagttattgatgctgtcgaatttgtt
ctccaaaatttcacggaaatgaacaaactttgggtccgaatgcaatatcaggggccaact
cgggaaagggagaagcgggaaaaagaaaggagtgagcttcgtgatcttgttggtaaaaac
cttcatgttctcgggcagattgagggtgttgaccttgaaatgtataaagaaaccgtgctt
cccagagttttagaacaagttgtcaactgtaaagatgagcttgcccaatactacttgatg
gattgcataattcaagtctttcccgacgaataccatttgcagacccttgaaacattattg
aatgcttgccctcagcttcagtcctctgttgatgtaaaaacagttcttgctcggctaatg
gaaagactttcaaattatgctgcttccggtgctgaagtcttgccggaactttttcaagta
gaagcttttgccaagttgaacaatgctatagacaaggtgatagcagcgcaagataatatg
cctattgttggagtagtaactttgtatgcctctctattgacatttactctacaagtacat
cctgatcggcttgattatgttgaccaaattcttggagcatgtgtaaagaaactttcagga
aaagaaaggcttgatgacaacaaagcgacaaaacaaatcatttctcttctaagtgctcca
cttgagaaatataaagatattgatactgtgttgaagctgtcaaattatcctcttgtcata
gaatttctaaatggtcaaacaaataaagagatggccaatgtaatcgttcaaaacataatg
aaaaacaggacctgcatttcaactgctgagaaggtagatgcattgtttgaattgataaag
gggctcattagagacttgaatgatcttcatgatgagctcgatgaggaggatttcaaagag
gagcagagttttgttgcgcgacttatccaaatgatgtacagtgatgatccagaagagatg
ttgaagatcatctgtgctgtgaagaagcatattttgacaggaggagcaaagagactgcca
tttactatccctccactgatatttagtaccttaaagttgataaggcgattggaaagtcaa
gatgatagtgtatccaaggaagatgactcagctatgccaaaaaaattatttcagatagtg
acacagacgattgaagctttgtgcagtgttccagttcctgaactggctctagggctgtat
ctgcagtgcgctgaggctgcaaatgactgtgatttagaacctgttgcgtatgaatttttc
acccaagcttatattttatatgaagaagaaatcacggattcgaaagctcaagtaaccacc
atacacctaattatagggacacttcaaagaatgcacgtctttggcgttgagaacagggat
gcattaacacacaaggcgacagggtattctgccaagctgttgaagaagcctgatcaatgc
agagctgtttatgcatgttcccaccttttttggcttgatgaaaatgacagtatccgggat
ggagagagggtcttgctttgcttgaaacgtgctcagagaattgccaatgctgcacagcaa
atgtccaatgcaactcgagggagcagcggatcagttttactctacatagaaatattaaac
aagtatctctacttctacgagaagggtgtcccgcagattactgctgatttaattcagggc
ttgatcgaattgatcacaagtacaacaggtggcgaaaacacaccacctgatccagcagca
gatgcttttcttgccagtacggtaaggtatattcaatttcagaagaacaaaggcggtgca
gtggcagagaaatacgagcatatcaaggtctaa
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