Henckelia pumila: 140887378
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Entry
140887378 CDS
T11037
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
hpum Henckelia pumila
Pathway
hpum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140887378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140887378
03036 Chromosome and associated proteins [BR:
hpum03036
]
140887378
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140887378
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140887378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
Nucleoporin_N
Beta-prop_RSE1_2nd
NUP160_helical
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
140887378
NCBI-ProteinID:
XP_073150699
LinkDB
All DBs
Position
3:complement(43114299..43144270)
Genome browser
AA seq
1507 aa
AA seq
DB search
MESTGGWRMAGMEVPILSTDSIEWVQVSIPSSSNSHPSTSQNPVAKDFASCCPIGDPPSY
FIWKISKSHSNILELLELSNNNEIPSIGLRLIFPDTLFPFAFICKNEEKLASGNQFLLYA
LTMSGVAFLIRLRNSFDYGPYSVIPTDEILEYNTQIQPYDGAIKAVSATAGCLVIGRSDG
SVRYFQLGIVDPSAPGFVSELRDDTGFGRLWGILSRGPTLAGVQDLVISEMHQRKLLFVL
HSDGCIRVWDLSSCSKIFSNMMTDPTLPGALVRLWVGEADYNTGIIPLAILHNQHLGDGT
DSIFLHGLRCNAGDRFALFLEPSLKKISLREGGPIDICLSSNKLWILKEDGLLLHNLFCD
DHEGLAHYYQLQETFVADLLFQSSEHSSADLFSLACAAFSSSKEEVVPFVSSVFLRGLLF
PGVHYNAALKQTFADHSKHFTDSEFGSFTTNGIKNEILSLIGHQGGYESPVSTFHCWNRF
CSRFVDNWCKNNAACGIFMDPVTGAVGLVRSSTISIFRGLVDAEHMIYGSFDGQKHLSYS
GDEFDLEIQLDFVKCVHDVSQQLGKASSAIFYESLLCRPNISSEDVIPHFLKILETGYGS
SVAALQISELGADVVSEKELSNHRNLRKFSTEMFLSLHALCYKANSWDKILDVAERYLKF
LVPQKMVLGVDFESVFCINSSAMVQATSQIAKVMFESAFDVLMLLSYMISISGQINMSHS
HVSRVKVELVPMIQEIITEWHIIHFFGTTPSESPSVEDFSSQLSSLQIDSNADRRLWNGR
LGKCEFSLAFILLLSMQSLPGDLKHRSLTRLPNPSNLISLSQEFTSWIIWGRAGEESSEF
FSNSIDLALILLRQGQYNATEYLLSLVDVYLRKEKIFESLQDINRKLPTLLHLLGCCLVA
QTQHEILVPIKDRNACEAVRCFFRASSVKGSSAALQSLPREAGWLRVDFSSFSSAVAWKL
QYYQWVMQLFEQFNMNEAANQFALAALELVDEALRPADSSSQENSVESVTTVKGRLWANV
FKLTLDLNNYHDAYCAIVSNPDEESKSICLRRFIIVLHERGAVKMLCDGQLPLIGLVEKV
EQELARKAERSDFSTKPNPFQLLYAFQMYRHNWRSAASYIYLYSVQLRAEAATKDRQYRS
LALQERLNALSAAVNALQLAHPAHAWIDSPIEENFHDKDNYPNKKARLIMQEPPPADDSL
PQKSRSYLDVEKLESEFVLTSAEYLLSLENINWTSTGNENPSSELIDLLVEMNLYDMAFT
VILKFWKGSALKRELERVFTAMAFKCCPSKPVSSLLGQRQLKDMSAFPSKDSRTRGLLLT
SGHHEAVQNSNEMIAPVQQSISSGHWLTLELYLDKYIPSHPRLPLIVARALLSADPQIEL
PLWLVRVLKDARTESGFGMTGRESSPASLFCLFVDYGRYVEAINLLIEYVEALAAVRPAD
VIRRKKPFAVWFPYTSIERLWCLLEESVRLGHRIDQCEKLKKLLHGVLLNHLNLLKVDSD
DARSSII
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccggcgggtggcgcatggcggggatggaggtgccgatacttagcaccgac
tccatcgagtgggttcaagtctccatcccctcttcttctaattcacatcccagtacttct
caaaacccagttgccaaagacttcgcctcttgctgcccaatcggagatcccccctcttat
tttatctggaaaattagcaagagccattcaaatatcctggagcttctggagttatccaat
aataatgagataccaagtatcggacttcgactcattttccctgacactctttttccattt
gcttttatctgcaaaaatgaggaaaagttggcatctgggaatcaatttttgctttatgct
ctgacgatgtcaggggttgcattccttattaggttgaggaacagttttgattatggacct
tattctgttatcccaactgatgagatacttgagtacaacacacaaattcaaccgtacgat
ggagcaataaaagccgtttcagcaacagcgggttgtcttgtaattggaaggagtgatgga
tctgttcgttattttcaacttggcatagttgatcccagtgctccaggctttgtgtctgaa
ctgcgagatgatactggatttggtcggttgtggggcatattatcgaggggtccaacgcta
gctggtgtacaggatttagtaatatcagagatgcaccagagaaaactactttttgtgctt
cattctgatgggtgtattcgagtctgggacctttcaagctgtagtaaaattttcagtaac
atgatgacagacccaacattaccaggagctttggtgaggctgtgggtgggggaagctgat
tataatacagggataattcctttggcaatactccacaaccagcatttgggagatggcaca
gattcaatatttctacatggtcttcggtgtaatgctggggacaggtttgcattgtttctg
gagccttcattgaaaaaaatttcattacgggagggtggacctattgatatttgtctgtct
tcaaacaaattgtggattcttaaggaagatggacttttactgcacaacttgttttgtgat
gaccatgagggattagcacattactatcaattgcaggaaacattcgttgctgaccttcta
tttcaaagttccgagcattcttcagcagatcttttttcgcttgcatgcgcggcattttca
tcttccaaggaggaagtcgtcccatttgtctcttctgtgtttctacgtgggctacttttt
cctggtgtgcattacaatgctgctctcaagcaaacatttgcagatcatagcaagcacttc
actgattctgaatttgggtcgttcactaccaatggaattaaaaacgaaatactgtcactt
attgggcatcagggtggttacgaaagtccggtttcaacttttcattgttggaataggttt
tgctcccggtttgtggataattggtgcaaaaataatgccgcatgtggcatattcatggat
cccgtcacaggtgcagttggcttagtcaggagtagcacaatatctattttccgtggtttg
gtggatgcagagcatatgatctacggttcctttgatggacaaaagcatttaagctattct
ggtgatgagtttgacttggagattcaacttgattttgtcaaatgtgtgcatgatgtgagc
caacagttgggaaaagcttcatcagctatattttacgagtcacttctatgcagacctaat
atatcatctgaggatgttattcctcactttctaaagatcctagaaactggatatggttct
tcagttgcagctctacagatatcagaactaggagctgatgttgtatcagagaaagagttg
tctaatcatagaaatctgaggaaattttccactgaaatgtttttgtctctccatgcttta
tgctacaaagccaattcttgggacaagatcttggatgttgctgagagatacctaaagttt
ttggtgcctcaaaaaatggtacttggtgtagatttcgaatcagtcttctgtataaatagt
tctgctatggtgcaggctacttcccaaattgccaaagtgatgtttgaatccgcatttgat
gttcttatgctgttaagctatatgattagcatcagtgggcagataaatatgtctcatagc
catgtttcaagagttaaggttgagttagttccaatgattcaagaaattattacagagtgg
cacattattcatttctttgggactacaccatctgaatctccctcagttgaagattttagc
tctcagctttcatccttacaaattgatagcaatgccgatagaaggctgtggaatgggagg
ctagggaaatgtgaattttctctagcatttatcctattactgagtatgcaaagtttaccg
ggagatctgaagcatcgttctttgactcggcttccaaatcccagtaacttgattagttta
agtcaggaatttacgagctggataatttggggaagagctggagaagaatcttctgaattc
ttcagcaattcgattgatcttgctctaatcttacttaggcagggccagtacaatgcgacg
gagtatttgctcagtttggtggatgtttatttgcggaaggagaaaatcttcgaaagcctt
caggacatcaataggaaattgcccacacttctccatcttcttggatgttgtctcgttgct
cagacacaacatgaaatactcgttccaattaaagacagaaatgcttgtgaagctgtacgc
tgctttttcagagcttcatcagttaaaggatcttctgcagctttgcaaagtttgccacgt
gaggcaggatggctgcgagttgatttcagtagcttttcctcagctgttgcatggaagctt
cagtattatcaatgggtgatgcagctatttgaacagttcaatatgaacgaagctgccaat
caatttgctctggctgcacttgagctggttgatgaggctcttcgccccgcagatagcagc
tcacaggagaattctgtggagtcagtgactactgtgaagggccgactatgggctaatgtc
tttaaattgacgttggatcttaataactaccacgatgcttattgtgcgatagtatcaaat
ccagatgaagaaagcaagagtatttgtttgagacgattcattatagtgcttcatgagcgc
ggtgctgtgaagatgctttgtgatggccagctaccattgattggtttagtggagaaggtg
gagcaagagcttgcccggaaggctgaacgttcagatttttcaacaaagccaaatcctttt
caattactttatgcttttcagatgtacagacataactggcgtagtgctgctagttacata
tacttgtactctgtgcaattgagagctgaagcagcgacaaaagatcgtcagtataggtct
ttggctctgcaagagagattgaatgctctatctgctgctgttaatgctttgcagcttgct
catcctgcacatgcttggattgattctcctatcgaagaaaattttcatgacaaagacaat
tatccaaataaaaaggcgaggctgattatgcaggaaccacctcctgccgatgattctctc
cctcaaaagtcacggtcttatttggatgttgagaaacttgaaagtgaatttgtcttaaca
tcagcggaatatctgctttctttagaaaacatcaactggactagtactggaaatgagaac
ccgtcttctgagcttattgatctgttggttgagatgaatttatatgatatggcttttaca
gtgatattgaagttctggaagggttcagcattgaaaagggaacttgaaagagtctttact
gccatggcattcaaatgctgcccgagcaaaccagtttcctcgcttctgggccaacgtcaa
ctgaaagatatgtctgcctttcccagcaaagatagtagaacacgtggccttttgttgact
tcaggacatcatgaagctgttcagaactcaaatgagatgattgcaccagtacaacaatct
ataagcagtggccattggcttacgcttgaactctatcttgacaagtacataccttctcat
ccgagattaccactaattgttgcccgagcacttctttcagctgatcctcaaattgaatta
cctctttggttggttcgggttctaaaggatgctcgaactgaaagtggtttcggaatgacc
ggaagagagtcaagcccggcatcattgttttgcttgtttgtcgattatggccgttacgtg
gaagcgattaatttgttgattgagtatgttgaagccttggcagcagttcgaccagctgat
gtcatccgtcgcaaaaagccatttgcagtatggtttccatatacttctattgaacgtttg
tggtgcttgctcgaggaatcagttagactggggcacaggattgatcagtgtgaaaagctg
aaaaagttattgcatggggtgttgttgaaccatctcaatcttctgaaagtggactcagat
gatgcccggtcttccataatttag
DBGET
integrated database retrieval system
