Henckelia pumila: 140887409
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Entry
140887409 CDS
T11037
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
hpum Henckelia pumila
Pathway
hpum03082
ATP-dependent chromatin remodeling
hpum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140887409
03083 Polycomb repressive complex
140887409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpum03036
]
140887409
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140887409
Histone modification proteins
HAT complexes
HATB complex
140887409
HDAC complexes
Sin3A-HDAC complex
140887409
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140887409
PRC2.2
140887409
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140887409
Heterochromatin formation proteins
Other heterochromatin formation proteins
140887409
Chromatin remodeling factors
NuRD complex
140887409
NuRF complex
140887409
NuRF complex (fruit fly)
140887409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
140887409
NCBI-ProteinID:
XP_073150742
LinkDB
All DBs
Position
3:27174781..27182092
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AA seq
494 aa
AA seq
DB search
MEATPTPEPKKRGRPKGSTKSKGDKEKDSGGGGGPPHPRMRGSGGEKRNAAAEESYGHWK
LLVPVLYDWLAHHNLVWPSLSCRWGPVLEQGNYKTKQRLYLSEQTDHTQPNTLIIANCEV
VKPRVASENHIANFNEDARSPYVKKYKTILHPGEVNRIRELPQNKNIVATHTDCPEVLIW
DVESQPNRHAVIGAAESRPDLILSGHQDNAEFALAMCPAEPFVLSGGKDKTVVLWSIQDH
VSSLATDVTQSAESTSSIVKAADNSPIGPRGIFQGHTDTVEDVQFCPSSSQQFCSVGDDS
CLILWDARIGNSPVVKVEKAHNADLHCVDWNSQDENYILTGSADHSVCMFDRRTLTSDGV
GSPVHKFEGHTAAVLCVQWSPDKRSVFGSSADDGLLNIWDYEKVGNQEEAGSKSPNTPSG
LFFQHAGHRDKVVDFHWNANDPWTIVSVSDDGEFSGGGGTLQLWRMIDLLYRPKDEVLEE
LQQFKDHVIECAKT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacgccgactcccgagccgaagaagcgtgggaggcccaagggttccaccaaa
tccaaaggagacaaggagaaggactccggcggaggaggaggtccgccgcaccccagaatg
agaggctccggcggtgagaagagaaatgccgccgccgaagagagctacgggcactggaag
ctgctggttccggtgctttacgactggctcgcgcatcataacctagtttggccgtctctc
tcttgccgttggggcccagttcttgagcaaggaaactacaaaaccaaacagcgtctttat
ctatctgaacaaaccgaccacacacaacctaacactttgattatagcaaattgtgaggtt
gtcaagccccgagttgcttcagaaaatcacattgctaatttcaatgaagatgcgcgttca
ccatatgtcaagaagtacaaaactatcttgcatccgggagaggtgaacagaatcagggaa
ctgcctcagaataaaaatatagtagcaacacacactgattgtcctgaagttcttatttgg
gatgttgaatcccaacctaatcgacatgctgtcattggagctgctgaatctcgtcctgat
ttgatattatctggacaccaagataacgcggaatttgctcttgcaatgtgcccagctgaa
ccttttgtgctttctggagggaaggataaaactgtggtattgtggagtattcaggatcat
gtttcatctctggccacagatgtaacccaatctgctgaatctactagttcaattgtgaaa
gctgctgataattctcccattggtccgcgtggaatttttcaggggcacactgatacagtt
gaggacgttcaattttgcccatcaagttcacagcagttttgtagtgttggagatgattcc
tgcttgatactgtgggacgcaaggattggtaacagtccagtcgtaaaggttgaaaaggca
cataatgctgatcttcattgtgtagattggaattctcaggatgaaaattatatattaaca
gggtccgccgatcattcagtttgcatgtttgatcgtcgaactttaacatctgatggagtt
ggatcgcctgtccataaatttgaaggtcatactgccgctgttctttgtgtccagtggtca
cctgacaagcgctcagtctttgggagttcagcggacgatggattgttgaacatttgggac
tatgagaaggttggtaaccaggaagaagctgggtccaaatctcctaataccccatcaggg
ctgtttttccaacatgctggacacagggacaaggttgttgacttccactggaatgccaat
gatccatggacaatcgtcagtgtatcagatgatggggaattctctggtggtggtggtaca
ttgcagctgtggcgaatgattgatttattgtaccggcccaaggacgaagttctggaagaa
ctgcaacagttcaaggaccatgtcattgagtgcgccaagacttga
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integrated database retrieval system
