Henckelia pumila: 140887516
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Entry
140887516 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K23288
syndetin
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140887516
Membrane trafficking [BR:
hpum04131
]
Protein recycling
Others
EARP complex
140887516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF6761
Motif
Other DBs
NCBI-GeneID:
140887516
NCBI-ProteinID:
XP_073150882
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All DBs
Position
3:63919881..63944321
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AA seq
1117 aa
AA seq
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MQRNTDLQALPFPLSPFLLLNAVGGVGDLGEGGFELSRYLFLGSLLFSREGGGMDLSKVG
EKILSSVRSARSLGLLPSPSDRPEVPARAAAAAAVARVLAGLPPHQRHALSLSSEELSSM
YGCRPQAVDELEEEFFEEEFDPVRYILEHIPSEEIEPSYFEEKATLRLAQLDKISERLSR
HVMEHHEEMVKGMNLVRELEKDLKIANVICMNGRRHLTSSRNEVSRDLIVTTNSKKKQTL
LDLLPILTEIGHAVDMQEALETLVEEGNFSKAFQILSEYLQLLDSLSGLSVVKEMTSGVE
VWLGKTLQKLDSLLSKVCQDFKEDDYLTVIDAYALIGDVSGLAEKIQSFFMQEALTESHS
ALRVIVQEDVEDSNMQNVRLTYSDLCLRIPESNFRQCLLATLSVLFKQMCSYYSIMSFQL
DENVSSFHSPSVKQRSNLSGISQDSKREASSSFLAEEGSHLSTASGFSLTSTDEPPEYSS
PVDHPNEEGRDNGSAASSSGSPWFLLRKDATLVVSHTLQRGRKNLWQLTTSRIAVLLSSS
AVTSSSIHQFLRNYEDLSIFILAGEAFCGIEAIEFRQKLKSICEGYFVAFHRQNIYALKM
VMEKENWQIMPPETVQVVSFAGLVGDGAALIISPDSSPSARLLHANRSVGSAVGGSKRSG
FSYWLECGNPFLLKQNVNSLEYSDSFHLNGVATHGESGNVNGKLRDIKFSHGSGDANHIN
GSPVSEDENDDLHADFIDEDSQLPSRISRPNHSRHQLTHGNNEDSIAQTGSSLSLLRLMD
KYARLMQKLEIINVEFFKGICQLFGIFFHFVFETFCQHGIPPGGKGFNYSLPHKLKTALS
RISQDYDQWVKPQPSPISSSSPTSMTSLSHKDVTPTSPPTHLNSTSSGLKERCAGADTLS
LVAKLLHRSKAHLQSRLLQNNGAIVEDFYVHLVDAVPELTQQIHRSTARLLLHVDGYVDR
IANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGLEIIAESLIE
GLSRVKRCTDEGRALMSLDLQVLINGLKHFVSIEVGPKLQAVETFIKAFYLPETEYVHWS
RAHPEYSKTQIVGLINLVATMKGWKRKTRLEVLEKIE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggaacacggatttacaagcactgccatttcctctgagtccgtttctgctgcta
aatgccgttggtggcgttggggatttaggtgagggagggtttgaattgtccaggtatctg
tttctgggatcgctgctcttctcccgagaaggaggcggtatggacttgtccaaggtcgga
gagaagatccttagctccgttcgctctgctcgttctctcggtcttcttccatctccatcg
gatcgcccggaggttccagcacgagccgccgccgccgcagctgtagcccgggttcttgct
ggactacctccacatcaaaggcatgctttatccttgagctcggaagagttaagttctatg
tatggatgcaggcctcaagcggtggatgagcttgaggaagaattcttcgaggaggagttt
gatcctgtaagatatattttggaacacattccctctgaggagattgaaccttcatatttt
gaggagaaggccactcttcgcctagcgcaactggataaaatttccgagcgcctatcacgt
catgtcatggaacatcacgaagaaatggtgaagggtatgaatcttgtgagggaactggag
aaggacttgaagattgcaaatgttatttgcatgaatgggcgaagacacctcacctcttca
aggaatgaagtgtctagggatctcattgtgacaacaaattccaaaaagaaacaaacactt
ctggacttgcttcccattctaaccgagattggccatgcagtggacatgcaagaggctctt
gaaactcttgtcgaggaaggaaatttttccaaggcattccaaatactatctgaatatttg
cagcttcttgatagtttgtctggcctttcagtagtgaaagagatgaccagtggtgttgag
gtatggttgggaaaaactcttcagaagctggattcacttctatcaaaagtgtgccaggac
ttcaaagaggatgactatttaactgtgatcgatgcatatgcattaattggtgatgtctct
ggcttagctgaaaagatacaaagtttttttatgcaggaggctctaactgaaagccactct
gctttgagggtcattgtgcaggaggatgtggaagattccaacatgcagaatgtaaggctt
acgtacagtgatttgtgtctacggatacctgaatccaattttagacagtgtttgctagca
acactatctgttctctttaagcagatgtgttcatattattcgataatgagcttccaactg
gacgagaatgtttcatccttccactctcccagtgtgaagcaacgtagtaacttatctggg
atctcacaggattctaagagggaagcttcttcctcctttctagcagaagaaggttcacac
ctttcaactgccagtggattttctttaacatcaacagatgagccacctgaatattcttca
cctgtagatcatccaaatgaagagggacgagataatggaagcgcggcatcaagtagtgga
tccccgtggttcctcctgcgaaaagatgctacattggttgtttcacataccttacagagg
ggtcggaagaacctgtggcaacttacgacgagccgaatagcagttttactttcttcttct
gctgttacttcgagtagcattcatcaatttttaagaaattatgaagacctaagtatcttc
attctggctggggaagctttttgtggaatagaagctattgaattccgacagaaactcaaa
tccatttgtgaaggttattttgttgctttccatcggcagaatatttatgcattgaaaatg
gtgatggaaaaggagaactggcagataatgcctcccgaaacagttcaagtagttagtttt
gcgggacttgttggtgatggagctgccctcattatttcacccgatagttctcccagtgcg
agattacttcatgccaatcgatcagttggttcagctgtgggtggatcaaagaggagcgga
ttttcatattggctggagtgtggaaatccattcttgttgaaacagaatgttaattccctg
gagtattctgattcctttcaccttaatggcgtagccactcatggagaatctggaaatgtc
aatgggaaactccgggatatcaaattttctcacggaagtggtgatgctaaccatattaat
ggaagtcctgtttcagaagatgaaaatgatgatctgcacgcagattttattgacgaagat
agtcagcttcctagtcgtatctccagaccaaatcattcaaggcatcaactgactcatggg
aacaatgaagattcaatcgcgcaaacaggatcatcacttagtctattgaggttgatggac
aagtatgcacgattgatgcagaaattagagatcatcaacgttgaattttttaagggaatt
tgccagttgtttggtatctttttccactttgtatttgagacattctgccagcatggcatt
ccccctggtggaaagggctttaattactctcttccgcacaagctaaagactgcactgtca
aggatctcacaagactatgaccagtgggtaaaacctcagccttcaccaatttcttcttcg
tcgccaacatccatgacttcattatctcataaagatgtcactcctaccagtcctcccact
cacttgaatagcacatcttctggtctgaaggaaagatgtgctggtgctgacacgctatct
cttgttgctaaattgttgcatagatctaaagcccatcttcaatcaaggcttctgcagaat
aatggagctatagttgaggacttttatgtgcatttggtggatgctgttccagaacttact
cagcagattcacaggtctactgcgagattgctacttcatgttgatgggtatgttgatcgg
attgccaatgctaaatgggaggtgaaggaactcgggttagagcataatgggtatgttgat
ttattgctgggggaatttaaacactacaaaacaaggcttgctcatgggggtatccgtaag
gaggttcaagatctcctcttagaatatggacttgaaattattgctgaaagcctcattgaa
ggcttatctagagtgaaacgatgtacggatgaagggagggcactcatgtcactggatctt
caggtattaataaatggcctaaagcactttgtctcgattgaagttggacccaaattgcag
gctgttgaaacttttatcaaggccttttaccttccagaaactgaatatgttcactggtca
cgcgctcatccggaatatagtaagacccaaattgttgggttgatcaacctggtcgcaaca
atgaaagggtggaaaaggaaaaccaggctggaagtgttggaaaaaatagaatga
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