Henckelia pumila: 140887655
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Entry
140887655 CDS
T11037
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
hpum Henckelia pumila
Pathway
hpum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140887655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpum02000
]
140887655
Transporters [BR:
hpum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
140887655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_23
RsgA_GTPase
nSTAND3
MukB
Motif
Other DBs
NCBI-GeneID:
140887655
NCBI-ProteinID:
XP_073151157
LinkDB
All DBs
Position
3:complement(38502700..38524446)
Genome browser
AA seq
1897 aa
AA seq
DB search
MEKNGEKMKTRSSRRQLKAMLRKNWLLKIRHPFITCAEILLPTVLMLLLMAVRMRVDTKL
HPPQPYIRKDMLVEVGKDAKSVPFNQILELLYNKGEYLAFAPDTSETRMMINILSIKFPL
LELTSIIYKDEEELETYIRSDLYGADDQVKNATNPKIKGAVVFHDQGPKVFDYSIRLNHT
WAFSGFPDVKSIMDINGPYLNDLELGVNTIPIMQYSFSGFLTLQQVLDSFIIYVQQQRVA
NIDTKDLVSPSKSALFHTQLIPWTQFSPSNIRLFPFPTRAYTDDEFQSIVKKVMGVLYLL
GFLYPISQLISYSVFEKEQRIKEGLYMMGLKDEMFHLSWFLTYALQFGVSSGVITLCTMG
TLFKYSDKTLVFVYFFSFGLSSITLSFLISTFFTRAKTAIAVGTLSFLGAFFPYYTVNDE
AVSLILKVMASFLSPTAFALGSINFADYERAQVGLRWSNIWRESSGVCFLVCLLMMVVDT
FLYGAVGLCLDKVLHRENKLLYQWRLRKHFWRKKNDSKQFSSSSVVKLAGSDSGINSRPF
QRDANEASVEEIGLELKQQESDGRCIQIRGLHKVYDTKKASCCAVNSLQLTLYENQILAL
LGHNGAGKSTTMSMLVGLVHPTSGDALVFGRNILTDMDEIRKSLGVCPQYDILFPELTVK
EHLEIFSDLKGVNEDRLKNAVMEMAEEVGLADKLNTVVGALSGGMRRKLSLGIALIGDSK
VVILDEPTSGMDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADVLGDRIAIMANGSLKCC
GSSFFLKQKYGVGYTLTLVKTTPTTSAAADIVYRHIPSAICVSEVGNELTFKLPLASSSS
FESMFREIECYVQRSNPTVGTVGYGDGNSLGIESYGISVTTLEEVFLRVAGGDFDNTECL
DSKKLLTTPDSNVQQPGENHTSNRIIYSKLCKSCIEVIGYMMATMGKASGLFWATTLHIL
NFISMQCCCFCTFSRSTFWKHSKALIIKRAMSARRDQKTIVFQLLIPAIFLLFGLLLVKL
KPHPDQQSITFTTSRFNPLLTGGGGGGPIPFDLSSLAANEVSEHVHGGWIQKFQPTTYRF
PDSQKAFEDAVEAAGPTLGPILLSMSEYLMSSFNESYQSRYGAVVVDKRSEDGSLGYTIL
HNSSCQHAAPTFVNLINSAILRLATLDENMTIQTRNHPLPLTQSQRLQRHDLDAFTVAII
VNIAFSFIPASFAVAVVKEREVKAKHQQLISGVSVLSYWASTYIWDFISFLIPSTFAILL
FSIFGLDQFIGRASFFPTILMFLGYGSAIASSTYCLTFFFSEHSMAQNVVLLVHFFTGLV
LMVISFIMGLIESTTYANTLLKNFFRLSPGFCFADGLASLALLRQGVKKGSGDTVFDWNV
TGASICYLAAEGIIYFVLTLGLELLLPLKINFVTASELFTSVKKMFDTTSSSSLQPLLKS
SSGDANDLEEDIDVQTERNRVLSGSVGRAIIYLRNLRKVYPGGKQQGSKIAVHSLTFSVQ
EGECFGFLGPNGAGKTTTLSMLSGEESPSSGTAFIFGKDIGSSPKAARRHIGYCPQFDAL
LEFVTVREHLYLYARIKGVQEYELERVVTEKLVEFDLLKHADKPSYALSGGNKRKLSVAI
AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRIG
IMVGGKLRCIGSPQHLKNRFGNHLELEVKPTEVSSLDLVTLCQAIQEEFFDIPYHPRSLL
TDLEGCIGGTESTTAATAAEISLSDEIIVTIGRWLGNVERVESLVSGDCGSHGILGEQLS
EQLLRDGGIPLPVFSEWWLTIDKFSAIDSFIQSSFPGATYQGSNGLSAKYQMPFQEDLSL
ADVFGHMERNRNELGISEYSISQSTLETIFNHFASNS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaacggagagaaaatgaagacgaggtcttcaagaagacagttgaaagccatg
ctccgaaagaattggcttctcaagatacgccacccgttcatcacctgtgcggagatattg
cttcctactgttcttatgttgctgctcatggccgtgaggatgagagttgatacaaagcta
catccgccacaaccatatattcgaaaggacatgctagttgaagtcgggaaagatgccaag
tccgtgcctttcaatcaaattttagaattgttgtataacaaaggtgaatatttggcattt
gcacccgacacaagtgagaccaggatgatgattaatatattgtccatcaagtttcctctg
ctcgagttgacatcaataatttacaaagatgaagaagagcttgagacatacatacgctcg
gacctgtatggtgccgatgatcaagtgaagaacgcgacaaacccaaaaattaaaggagct
gttgtttttcatgatcaagggcctaaggtgtttgattatagcatacgcttgaaccataca
tgggctttttctggattccctgatgttaaatctattatggatatcaatggtccatatctc
aatgacttggaattaggggtgaacacaataccaattatgcagtacagcttcagtggattc
ttaactcttcaacaggtcctggactccttcattatctacgtccaacaacaacgagtggca
aacatagacaccaaagatttagtatcaccttcaaagtcagctttgtttcacacgcaactc
ataccttggacgcagtttagcccttcaaatataagactcttcccttttccaactcgtgca
tacactgatgacgagttccagtccatcgtcaagaaagtcatgggagtgctgtacttgctg
ggatttctctatccaatttctcaactgattagttattctgtttttgaaaaggagcagagg
atcaaggaaggactctacatgatgggtttaaaggatgagatgtttcatctttcatggttt
ctaacttacgcactgcagtttggagtctcttctggtgtcatcactctttgcacgatggga
acccttttcaagtacagcgacaagacactggtgtttgtttactttttctcttttgggctg
agctcaataacactatcatttctgatctccaccttcttcactcgggcaaagactgcgata
gcagttgggacactttcttttcttggagctttcttcccttattatacagtaaacgatgaa
gctgtttctctgatattaaaggtcatggcatcttttctttcacccacggcttttgcttta
gggtctatcaactttgctgattatgaacgtgctcaggttggcctacgatggagcaacatc
tggcgggagtcttcaggggtttgtttcttggtctgccttttgatgatggtggttgacact
ttcttatatggtgcagttggtttgtgtttagataaggtccttcatagggaaaataagttg
ctctaccaatggcgtttacgtaagcacttttggaggaagaaaaatgatagcaagcaattt
tcttccagttctgtggtcaaactggctggcagtgactctgggataaacagtcgtccattt
caaagagatgcaaatgaagcatccgtggaagaaataggtttagaattaaagcaacaagag
tccgatggcagatgtattcagattagaggtctgcacaaggtgtatgatactaagaaggca
agttgctgtgctgtcaattctttacaattgacgctgtatgaaaatcaaattctcgctctt
ttaggacacaatggtgctggtaaaagcacaacaatgtccatgctcgttggtcttgttcat
cctacatctggagatgcattagtttttggacggaacatcttgacagacatggatgaaatt
cgcaaaagtttgggtgtctgcccacaatacgacattctttttccagaattgacagtgaag
gagcacttggaaatattttctgatctaaaaggtgtgaatgaagatcgcttgaaaaatgct
gtgatggaaatggctgaagaagtaggtttggcagacaagctcaatactgttgtgggagct
ctttctggaggcatgaggaggaaactatctcttggaattgcattaataggagacagcaag
gttgttattcttgatgaacccacaagtggaatggatccttactcaatgcggttgacatgg
cagttaattaaaagaattaaaaagggaaggataatattactaactactcactccatggat
gaagctgatgtgctaggagatcgaattgctatcatggctaatggttctctgaaatgctgc
ggaagttcctttttcttaaagcagaagtatggtgttggttacactcttactctggtcaag
actacacctactacctctgcagcagctgatatagtttaccgtcacatcccatcagcgata
tgcgtgagcgaagttggtaatgagcttacattcaagcttcctcttgcttcctcctcatca
tttgagagcatgtttcgggaaatagagtgttatgtgcaaagatcaaatcctactgttgga
actgtaggttatggggatggtaattcgcttggcattgaaagttatggcatttctgtcaca
actttagaggaagtatttttgagagttgctggtggtgattttgataacactgagtgcctt
gatagtaagaagcttttaacaactcctgattctaatgttcagcaacccggcgaaaatcac
acatcaaatcgaataatttattcaaaactttgcaaaagttgtattgaagttattggctac
atgatggcgactatggggaaagctagtggtctattttgggcaactactctgcatatctta
aatttcattagtatgcagtgttgttgcttttgcacattttcaaggtcaactttctggaaa
cactcaaaagcattaattataaagagagcaatgtcagctcgccgtgatcaaaaaacaatt
gtttttcagttgttgatcccggccatctttttgcttttcggtcttcttttagtcaagctt
aagccgcatcccgaccagcaatccataaccttcacaacctcacgcttcaatccactatta
actggtggaggtggaggtggaccaattcctttcgatctatcgtcgctagctgcaaatgag
gtttcggagcatgtgcatggaggatggattcaaaaatttcaaccgactacatatagattt
cctgattcacagaaggcatttgaagatgctgttgaagctgcggggccaactttggggcca
attttactttcaatgagtgaatatctaatgtctagctttaatgaatcctatcagtctaga
tatggagcagtagttgttgataaacggagtgaggatggaagtcttggttacaccattctt
cacaatagttcctgccagcatgctgctccaacctttgttaatttgataaattcagcaata
ctcaggcttgctacccttgacgagaatatgactattcaaacacgtaatcaccctttgcca
ctgacacagagtcagcgtctgcaacgtcatgatctggatgcctttactgtggccattatt
gttaatattgccttctccttcatccctgcttcatttgcagtggccgttgtgaaggaacgt
gaagtgaaagcaaagcaccaacaacttattagtggggtgtctgtactttcatattgggct
tcaacttatatatgggatttcatcagcttcttaattccgtccacttttgcgattcttctt
ttttccatatttggtctagatcaattcatcgggagggcctctttcttcccaactatcctc
atgtttctaggatatggatcggcaattgcatcatctacgtactgcctgacgtttttcttt
tctgaacatagcatggcacagaatgttgtcctcttggtacattttttcactgggctcgtt
cttatggttatatcattcataatggggctcatagaatcaacaacatatgcgaacactctt
ctcaagaatttcttcagattgtcgcctgggttttgttttgctgatggattagcttcgtta
gctcttttgcgccagggggtgaaaaaaggatcaggtgatactgtatttgactggaatgta
actggtgcctccatttgttatttggctgctgagggcatcatttactttgtgttgacactt
ggtcttgaacttttgcttcctctcaaaataaattttgtgacagcatctgagttgtttaca
agtgtaaaaaaaatgttcgacacaacttccagtagctctttacaaccgcttcttaaatca
agctcaggagatgctaatgatcttgaagaggatatagatgtacaaacagaaagaaacagg
gtgctatcaggttcagtgggcagggctattatctatctgcgtaatcttcgtaaggtttat
ccaggagggaagcaacagggttcaaaaatcgcagttcattcattgacgttttctgtacaa
gaaggagaatgttttggttttcttggccctaatggagcagggaaaacaacaactctgtcg
atgctctctggagaagaaagtcccagctctggaactgcctttatttttggtaaagatatc
ggatccagcccgaaggctgctcgtcgacatattggttattgtccgcaatttgatgctctg
cttgagtttgtcactgtccgggaacacctttacctctatgcaagaataaaaggagttcaa
gagtacgaacttgaacgtgtagtgactgaaaagttggtggaatttgacttgttgaagcat
gctgataaaccatcatatgcattaagtggtggaaacaaacggaaattatctgttgcaatt
gcaatgattggagatcctcctattgtaattcttgacgagccatctactggaatggatcct
attgctaaaagattcatgtgggaagttatatcacggctatcaactagacgaggaaagaca
gctgtcatcctaactacccacagcatgaatgaggctcaagctctttgtactaggatcggg
ataatggttggaggaaagctaagatgcattgggagtcctcaacatttgaaaaatagattt
ggaaatcatcttgaactagaggttaaaccgactgaagtaagctccttggacttggttact
ttgtgccaagccattcaggaggagttcttcgacattccgtatcatccacgaagtttactt
actgaccttgaaggttgtattgggggtactgagtcaacaactgcagctacagcagccgag
atcagcttatcggatgaaattattgttacaatcggaagatggcttggcaatgtagaaaga
gtggagagtcttgtatcaggagattgcggttctcatgggattttgggtgaacagttgtcc
gagcaattgcttcgtgatgggggtattccactgcccgtgttttcagagtggtggttaacg
atagacaaattttcagcaattgattcatttattcagtcctcctttcctggtgcaacgtac
caaggtagtaatggattgagcgcgaaatatcagatgccgttccaggaagatctctcgctt
gctgatgtttttgggcacatggaaaggaacagaaatgaactgggtatatctgagtacagc
atcagccaatctacactcgagacaatatttaaccattttgcttcgaattcttga
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