Henckelia pumila: 140887695
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Entry
140887695 CDS
T11037
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
hpum Henckelia pumila
Pathway
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140887695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140887695
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140887695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
140887695
NCBI-ProteinID:
XP_073151223
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Position
3:complement(88367963..88370572)
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AA seq
379 aa
AA seq
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MRETGEGLGLNFEKLMVFGDVEGVDENENMVCQVGGGLCGGSKISEWKDIPVELLLRILS
LVDDPTVIVASGVCHGWRDAISWGLTHLSLSRCKKNMNDLVLSLVPRFTKLQVLILRQDS
PQLQDVAVETIAKHCGDLQELDLSKSFRLTDRSLYALADGCPNLVKLNISGCSAFNDTAV
AYLSGFCRKLKILNLCGCVKAASDRALKAIGYNCDQLQSINLGWCDRVGDEGVKSLAYGC
PDLRALDLCGCVLITDESVIALANNCRHLRSLGLYYCKNITDRAMYSLAHSRVKNKHEMW
ASVKKNRYEEEGLTNLNISQCTALTPPAVQALCDSFPALHTCSGRHSLIISGCLSLTSVH
CACAVQAHRAAPAMAHLAH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaacaggggagggtctggggttgaattttgagaagctgatggtttttggtgat
gtcgagggtgtggatgaaaatgaaaatatggtttgtcaagtgggaggaggtctttgtggg
ggatcgaagataagtgagtggaaagatattccagtggagcttttgttgaggattctttct
ttggtggatgatcccacagtgattgtggcatctggtgtttgtcatggatggagggatgcc
atttcttgggggctcactcatctctccctctctaggtgcaagaagaacatgaatgatctg
gtgctatcactggttccgagattcacaaaacttcaggtccttatcttgcgacaagactcg
cctcaacttcaggatgttgctgttgaaacaatcgcaaaacattgtggtgacctccaagag
ttggatctgagcaagagtttcaggcttactgatcgttccttgtatgccttagcagatggc
tgccctaatctcgtgaagctgaacataagcggctgttcggctttcaacgatactgctgtg
gcgtatttgtctgggttttgccgaaagttgaaaatcttgaatctctgtggatgtgtcaag
gctgcctcagatagggcactgaaggccattggatataattgtgatcaattgcagtcgata
aacctaggatggtgtgaccgagttggtgatgaaggggtcaagagcttagcctatggttgc
ccggatctccgagctcttgacttgtgtggatgtgttcttataacagatgagagtgtgatc
gccttagcaaacaactgccggcatctgcgatccctcggtttatactactgcaagaatatc
accgacagagccatgtattctctggcgcatagccgagtgaaaaacaagcatgaaatgtgg
gcatccgtgaagaagaacaggtacgaggaggaaggccttacgaacctgaacatcagccaa
tgtactgcccttactccgcctgcagtgcaggcactctgtgactcatttccagctcttcat
acatgttccggtcgccattcccttattatcagtgggtgcctgagcttaacatctgtccat
tgtgcttgtgctgttcaagctcaccgtgccgcacctgcgatggctcatctagctcactga
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