Henckelia pumila: 140888331
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Entry
140888331 CDS
T11037
Name
(RefSeq) small ribosomal subunit protein RACK1
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
hpum Henckelia pumila
Pathway
hpum03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
140888331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140888331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140888331
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140888331
Exosome [BR:
hpum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140888331
Exosomal proteins of colorectal cancer cells
140888331
Exosomal proteins of bladder cancer cells
140888331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_RIG_2nd
TRM82_WD
ASA1
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_ACSF4
PAC11
Beta-prop_NWD2_C
eIF2A
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PROPPIN
Beta-prop_Vps41
DUF7899
Beta-prop_NUP159_NUP214
WD40_RFWD3
Tricorn_2nd
Beta-prop_pof12
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
140888331
NCBI-ProteinID:
XP_073152117
LinkDB
All DBs
Position
1:91054151..91056591
Genome browser
AA seq
329 aa
AA seq
DB search
MAQEQLILRGTMRAHTDWVTAIATPIDNSDMIVSSSRDKSLILWSLTKEDKNYGVARRRL
TGHGHFVQDVVLSSDGQFALSGSWDGDLRLWDLQSGATARRFVGHTKDVLSVAFSIDNRQ
IMSASRDKTIKLWNTLGECKYTIQDQDAHSDWVSCVRFSPNATQPMIVSGSWDRTVKIWT
LANCKLRSTLTGHSGYVNTVAVSPDGSLCASGGKDGIILLWDLAEGKKLYSLDAGSVIHA
LCFSPNRYWLCAATESSIKIWDLESKSVVVDLKVDLKQESEMAAEETTQSVACKNKINYC
TCLSWSADGSTLFSGYTDGVIRVWGIGRY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagagcaattgatccttcgcggcacaatgcgtgcccacaccgactgggtcacc
gccatcgccacccccatcgacaactctgacatgatcgtctcttcctcccgtgacaaatcc
ctcattctctggtccctcaccaaggaggacaagaactacggagttgcccgccgccgcctc
actggacatggacacttcgttcaggatgttgtcctgtcatccgatggccagttcgctctt
tctggttcttgggatggagatctacgtctgtgggatctgcagtctggggccacagctcgc
cgctttgtgggccacactaaagacgtgttgtctgttgccttctcgattgataacaggcag
atcatgtcagcgtccagggacaagacgatcaagctgtggaatacgcttggcgaatgcaag
tatacgattcaggatcaggacgctcattccgattgggtttcttgtgtgcggttttctcca
aacgccacgcagccaatgattgtttcagggtcttgggatcggacagtaaagatttggact
ttggccaattgtaagctgaggtctacattgactggccattcaggatatgtgaatactgtg
gcggtgtctcctgatgggagtttgtgcgctagtggtgggaaagatggaattattttgctc
tgggatttggctgaagggaagaagctttattctctggatgctggctccgtgattcatgct
ctgtgcttcagcccaaataggtattggctgtgtgctgccacagagtctagtatcaagatt
tgggatttggaaagcaagagtgtcgtggtagatcttaaggttgatttgaagcaagagagc
gagatggctgccgaggaaacgactcagtccgttgcttgtaaaaacaagatcaattactgc
acctgtcttagctggagtgctgatggaagcacacttttcagtggttacacagatggtgtt
attcgagtttggggcattggacgctactag
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