KEGG   Henckelia pumila: 140888466
Entry
140888466         CDS       T11037                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
hpum  Henckelia pumila
Pathway
hpum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140888466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hpum03041]
    140888466
   04121 Ubiquitin system [BR:hpum04121]
    140888466
Spliceosome [BR:hpum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    140888466
Ubiquitin system [BR:hpum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140888466
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 140888466
NCBI-ProteinID: XP_073152251
LinkDB
Position
3:71254323..71261821
AA seq 907 aa
MRVEDDTPTRERWTGDYDDQEGNVPEENPDLGKQRSKDNNKNHGHREEKDYKSKSSKERE
KEDKDSASSKIRRKDRDERVKVEVRDRVMEKDVDREKRREKERDKERGDRGKEKKLERRR
ENDLERDGDRGGDTERGHEKIRDKDKDREKERDRAKDKEREKQKDREREKDNGRDRFKEA
DERDKGKEKNREKEKQTAQEKDRVRERGRSDRRQKDGGRERSQGVEEDIVNHVQDHQPTT
EVNNPDDENDSKILQHQQNADAELVAAVPLESSNLKERISLMKAERLNKSSEGDSEVSSW
VIRSRKIEQKRISEKERALQLSKVFEEQDNMNDEESDDEKIMQHTSEDLGGVKILHGLDK
VLEGGAVVLTLKDQNILVDSDINQEVDTLENVEIGEQKRRDEAYRAGKKKTGVYDEKFDD
ESGGPKKMLPQYDDPVTEEGITLDSSGRFTGEAERKLEELRKRIQGVPTSNLSENLNSIG
KTSTDYYTEEEIIKFKKPKKKKSLRKKVKLDIDALEAEAISSGLGAGDLGSRSDGRIQNL
REEQERIEAEKRKNAYQSAYAKADEASKALRREQINSIQAEDDSFVYGDDDDELLKSLER
ARKIALKEQDEEKKSALQVITLLATSTNDSPPDNHVSGDQQEEKVVLTEIEEFVWGLQID
EDAQKPDREDFFMEEDAVPDTSDHEMKDADVDWAEVKETAEVEMLAKEKEVLVPDETIHE
SAVGKGLAGALKLLKDRGTLKETIEWGGRNMDKKKSKLVGIYDNDGAKEILIERTDEYGR
ILTPKESFRLLSHKFHGKGPGKMKQEKRMRQYQEELKVKQMKNADTPSLSVERMREAQAK
LQTPYLVLSGHVKPGQTIDPGSGFATVEKDLAGGLTPMLGNRKVEHFLNIKRKSEPGDAA
AQKKPKP
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgagggttgaagatgacactccgacaagggagaggtggaccggagactatgatgatcaa
gaaggaaatgtgcctgaggaaaacccagatttgggtaaacaacgaagcaaagataataat
aagaaccatggtcatagggaggagaaagattacaaaagtaagagctcgaaggaaagagag
aaagaggataaagattcagcatccagtaagattagaaggaaggacagagatgagcgagta
aaagttgaggttcgagatagagtaatggagaaagatgttgatcgcgaaaagcgcagagaa
aaagagagagataaagaacgaggggatcgaggaaaggaaaagaagctagagcggaggagg
gagaatgatttggagagggatggtgatagaggaggtgatacagagaggggacatgagaag
attagagacaaggataaagacagggaaaaggaaagggatagagcaaaagataaagagcgg
gaaaaacaaaaagacagggagagggaaaaggataatggcagagataggtttaaagaggca
gatgagagagacaaagggaaggagaaaaatagagaaaaagaaaagcagacagctcaagag
aaggatagggtaagagaaagaggtaggagtgatcgtagacaaaaggatgggggtcgtgaa
aggagccaaggtgtggaggaagatattgttaatcatgttcaagatcatcaacctactacg
gaggttaataaccctgatgatgagaatgactccaaaattctccagcaccaacagaatgct
gatgctgagctcgttgctgcagtacctcttgaatcttcaaacttgaaggaacgcatttca
ttaatgaaagcagaaagattgaacaagtcatcagaaggtgattctgaggtttcatcatgg
gtgattaggagccgaaaaatcgaacagaaaaggatttctgaaaaagaaagagcattgcag
ctttctaaagtatttgaagagcaggacaatatgaatgatgaagaaagcgacgatgaaaaa
ataatgcagcacacatctgaagatttaggtggggtcaagattcttcatggtctcgataaa
gtacttgaaggtggggcagttgtcttgacgctcaaagatcagaacatacttgtggatagc
gacatcaatcaagaggttgatacgcttgaaaatgtggagattggtgaacaaaaacgaagg
gatgaagcttatagggccgggaagaagaaaaccggtgtttatgatgagaagttcgacgat
gaatctggtggcccgaagaaaatgcttccgcaatatgatgatcctgtcacagaagagggg
ataactcttgattcaagtggacgtttcactggtgaagctgaaagaaaattggaagagctt
cgaaaaagaattcagggggttcctactagcaatctaagcgaaaatctcaattcaattggg
aaaacgtcgacagattattatactgaagaagaaattataaaatttaaaaagccaaagaaa
aagaagtccctgaggaagaaggtgaagctggatatagatgcccttgaagcagaggctata
tcctctggattaggtgctggagatcttggttcaagaagtgatgggagaatacaaaatctt
agggaggaacaagagaggatcgaggcagaaaaaagaaaaaatgcttaccaatcagcatat
gctaaagcagatgaggcttctaaagcacttcgacgggagcaaatcaattccatacaggca
gaagatgatagttttgtatacggtgatgatgatgatgaactcctaaaatcattggagagg
gcaagaaaaatagccttgaaagaacaagatgaagaaaaaaaatctgctctacaggttata
acccttcttgctacttccactaatgattccccgcctgacaatcatgtgtctggagatcaa
caagaggagaaggttgtcttaacagaaatagaagaatttgtctggggtctgcagattgat
gaagatgctcaaaagcctgaccgcgaagattttttcatggaggaagatgcagtaccagat
acctctgatcatgaaatgaaggatgcagatgttgactgggcagaggtgaaagaaactgca
gaggtcgagatgctagctaaggagaaagaagtgcttgttccagatgaaacaattcatgaa
tctgctgttgggaagggtttagctggggctctcaaacttttgaaagatcgaggaacactc
aaagaaactattgaatggggtggtcgaaacatggacaagaaaaaaagcaaactcgttggc
atctatgataatgatggagctaaggaaatactcatcgagaggactgatgagtatggacga
attttgacaccaaaagaatcttttcggcttctttcacataagttccatgggaagggtcct
ggaaaaatgaagcaagaaaagcgtatgcggcaataccaagaggaattaaaagtaaagcaa
atgaaaaatgcggatactccatctctttcagtggagagaatgagggaagctcaagctaaa
ctgcaaacaccgtatcttgtattgagtgggcatgtcaaaccaggtcaaacaattgatccc
ggaagtggctttgcaacagtggagaaggaccttgctggaggcttaacccccatgcttggt
aataggaaggttgagcactttttaaatatcaaacgcaagtctgagccaggagatgcagct
gcccaaaagaagcctaaaccttga

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