Henckelia pumila: 140889053
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Entry
140889053 CDS
T11037
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140889053
Membrane trafficking [BR:
hpum04131
]
Autophagy
Other autophagy associated proteins
Others
140889053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
BCAS3_WD40
EIF3I
KNTC1_N
Beta-prop_IFT122_2nd
Ge1_WD40
NBCH_WD40
Beta-prop_TEP1_2nd
DUF7099
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
140889053
NCBI-ProteinID:
XP_073152857
LinkDB
All DBs
Position
1:153781208..153785279
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AA seq
414 aa
AA seq
DB search
MATLSSFPSHPNPDPNPMLHPYLEQQQPWPQSDPPDDDYPEDLRSSSADSAAAPNPAAID
CPAKLLHVSFNQDYGCFATGTDGGFRIYNCDPFREIFRRDFDCNGGIGAVEMLFRCNILA
LVGGGDAPQYPVNKVMIWDDHQSRCIGELSFRSEVRGVRLRRDRIVVVLEQKIFVYNFSD
LKLLNQIETIANPKGLCAVSQVAGSFVLVCLGLQKGQVRVEHYASKRTKFILAHDSRIAC
FTLSQDGNFLATASSKGTLVRIFNTHDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSD
KDTVHVFSLKVNLGNVGSERSNSPPDSNTAVNTSISSLSFIKGVLPKYFSSEWSVAQFRL
PEGSQHIAAFGHQKNTVVILGLDGSFYRCKFDPAIGGEMAQLEYHNFLKPEEAF
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctactctctccagcttcccctctcacccgaacccggacccgaatcccatgctacat
ccatacctggagcagcagcagccatggcctcaatccgaccctcccgatgatgattacccc
gaagatctccgatcttctagtgctgattccgccgccgcaccaaaccctgctgcgatcgat
tgcccggcgaagcttctgcacgtgtccttcaatcaggattacggttgcttcgccacagga
accgacggaggatttagaatctacaactgtgaccccttccgcgagatcttccgccgtgat
ttcgactgcaacggtggcattggcgctgtggagatgctctttcgttgcaatatcctcgct
ttagttggtggcggcgatgcgccgcagtatccggtgaacaaggtcatgatctgggacgat
catcagagccggtgcatcggggagctttcctttaggtctgaggttcgtggggttcgatta
cgaagggatagaattgtggttgttctggagcagaagatatttgtctataatttttcggat
ttgaagctgttgaatcagattgaaacgatcgcgaaccccaagggtttgtgtgcggtgtcg
caggtagcagggtcgtttgtgttggtttgtctgggtttgcagaagggacaggttagggtg
gagcattacgcatccaaaaggactaagtttattcttgctcatgattcgaggatcgcctgc
tttacactgtctcaggatggcaattttcttgccacggcaagcagtaaaggaaccctggtt
cgaattttcaatactcatgatggctctttactgcaggaggtacggaggggtgcagacaga
gcagaaatatatagcctggcattctcacccactgctcagtggctggctgtctcaagtgat
aaggacactgttcatgtttttagcctgaaagttaatcttggaaatgttggaagtgagagg
tctaatagtccccctgattcaaatactgctgttaacacttctatttcgtctctctctttc
atcaaaggagtgctccccaagtacttcagttctgagtggtcggtggctcagtttcggttg
cctgaaggatctcaacacatcgcagcatttggtcaccaaaagaatacagtcgtaattctt
ggcttggatggaagtttttaccgatgcaagttcgacccagcaattggtggggaaatggca
cagttggagtatcataattttctcaagcctgaagaagccttctag
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