Henckelia pumila: 140890364
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Entry
140890364 CDS
T11037
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hpum Henckelia pumila
Pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140890364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hpum03041
]
140890364
Spliceosome [BR:
hpum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140890364
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
140890364
NCBI-ProteinID:
XP_073154604
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Position
1:158306413..158310974
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AA seq
486 aa
AA seq
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MVLVATLNDSFLADLDELSDNEDDLLEEEDSDAEHMEEDVDGDLADIESLNYDDLDSVSK
LQKTQRYTDIMQKVENALEKGSESSNVGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNF
IRDKYRLKFPELESLVHHPVDYARVVQKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTS
GKPLPDDVLQKTIDACDRALTLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTA
GGLSALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLL
AAKSTLVARVDSTRGDPTGKTGRTFRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG
GRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSK
LGTKVSKKFKEKRFGSSGATSGLTSSLAFTPVQGIELSNPQANVLGGGIQSTYFSETGTF
SKIKRT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtccttgtggcaacccttaatgactctttcctggccgatcttgacgaattatccgat
aatgaagacgatcttctggaggaagaggattctgatgcagagcatatggaggaagatgta
gatggggacttggcagatattgaatcacttaattatgatgatcttgatagcgtatccaag
cttcaaaaaactcaacgttacactgatatcatgcagaaagtggaaaatgcacttgagaag
gggtctgagagctcaaatgtcggaattgtattagaagatgatccagaatatcagttgatt
gttgattgcaatgcattgtccgtggatatcgaaaatgaaatcgtgataattcacaatttc
atccgtgacaagtatcgcctaaaatttccggagcttgagtcactcgtgcatcatccagtt
gactatgctcgagttgttcaaaaaattgggaatgaaatggacctgactcttgtggatcta
gaaggtcttctaccctctgccattatcatggttgtttctgttactgcatcgaccaccagt
ggcaagcctctcccggatgatgtcttgcaaaagacaatcgacgcatgtgatcgagctctt
actctagattcagcaaagaaaaaggttcttgattttgttgagagtagaatgggttatatt
gctccaaatctttctgctattgttggaagtgctgttgctgcaaaacttatgggaacagcc
ggtggtctctctgcattagcaaagatgccagcttgtaatgttcagcttctcggtgcgaaa
aggaagaacttagcagggttttcaacggcaacgtcccaatttcgtgttggttatttagaa
caaactgaaatatttcagagcactcccccttccttgaggatgcgtgcctgccggcttttg
gctgcaaaatctacacttgtcgcacgtgtcgattctactagaggagatccaacaggaaaa
actgggagaactttccgtgcagagattcataaaaagattgagaagtggcaagagcctcct
cctgccaagcagcctaagcctcttcctgttcctgattctgagcctaaaaagaagagaggt
ggacgaaggttgaggaagatgaaagaaagatatgccattaccgacatgcgtaagcttgca
aataggatgcagttcggtgttccagaggagagctctttaggtgatggacttggggaagga
tatggaatgcttggtcaggctggaaatggcaagctacgtgtatcagttggccaaagcaag
cttggtactaaagtatcaaaaaagtttaaggagaagcgttttggaagcagtggtgcaact
tctggactaacttcaagtttggccttcacccccgtgcagggaattgaactctcgaatcct
caggcaaacgtgcttggtggtggaattcagagtacttacttttcagaaactggaactttt
tcaaagatcaagcggacgtga
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