Henckelia pumila: 140890529
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Entry
140890529 CDS
T11037
Name
(RefSeq) zinc finger CCCH domain-containing protein 49-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hpum Henckelia pumila
Pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140890529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hpum03041
]
140890529
Spliceosome [BR:
hpum03041
]
Complex B
Other components
Prp19-related factors
140890529
Complex C
140890529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_10
zf-CCCH_4
zf-CCCH_3
zf-CCCH
RRM_YTH1
zf-CCCH_PARP12
RRM_3
Motif
Other DBs
NCBI-GeneID:
140890529
NCBI-ProteinID:
XP_073154481
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All DBs
Position
3:complement(42233012..42236542)
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AA seq
475 aa
AA seq
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MAHRLLRDAEADGWERTDFPIVCESCLGDNPYVRMTKADYDKECKICSRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE
EHDRKARAGIDYESSYGKVRASDTILKLQRTTPYYKRNRAHVCSFFIRGQCTRGPECPYR
HEMPETGELSQQNIKDRYYGINDPVALKLLSKAGEMPSLEPPEDESIRTLYVGGLDARIT
EQDLRDNFYAHGEIESIKMVIQRACAFVTYTTREGTERAAEELANKLVIKGLRMKLLWGK
PQAPKPESEGSDQASQQAAVAHSGLLPRAVISQQQTVQPTDIQNPPPMPYFNIPPLPEQD
RAYYPSMDPQRMGALIPSHEGSSSASGPGGSYESKSGSDQMQHQGQQFGYSSVRPPHMQF
YPPYHPQYGYMPPPVLPPWQQYPQPYPPPRPPLPHPDGDQVSFNPKAPTGAPQQS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatagactgctcagagacgcggaagccgatggatgggagcggactgatttccct
attgtgtgtgaatcatgcctcggagacaatccatacgttcgaatgacaaaagctgattat
gacaaggagtgcaagatatgttctcggccattcacagtttttagatggaggcccggtcgc
gacgcaagatacaaaaagacggagatttgccaaacttgctgcaagctgaaaaatgtttgc
caagtatgccttctagatcttgaatatgggctgccagttcaagttagagatactgccctc
agtatcgattcaaatgatgccattccaaagagcgacgttaatagggaatattttgcagag
gagcatgaccgcaaggcaagagctgggatcgattatgaatcttcgtatgggaaggtgcgc
gctagcgataccatcttgaaacttcagagaaccactccatattacaagagaaacagagct
catgtttgcagtttctttattcgaggtcaatgcactagaggtcctgaatgcccttatagg
catgagatgcccgaaactggggagttgtcacaacaaaacatcaaagaccgttactatgga
attaacgatccagtggcattgaagttgcttagcaaggctggagaaatgccttctctggag
cctcctgaagatgaaagcatcagaaccctgtatgttggtgggcttgatgcaagaattacc
gagcaggatttaagagacaatttctatgcccatggagaaattgaatccataaagatggtt
atccaacgtgcttgtgcttttgtgacttacacaacaagagaaggtacagagagggcggct
gaagaacttgccaacaagctagttattaaaggcttgaggatgaagctgctctggggtaaa
ccacaagccccaaagcctgaatctgaaggctctgaccaagcaagccagcaggcagcagta
gcgcacagtggattgttgcctagggcagtgatatcacagcagcaaactgttcagcctact
gacatacaaaacccgcctccaatgccgtacttcaacattcctccgctgcctgaacaagat
cgagcatattatccttcaatggatccccagagaatgggtgccctcattccatctcatgag
ggatcttcaagtgcgtctggccctggtggatcatacgagagtaaaagtggttcggatcag
atgcagcatcaaggtcagcaatttggttactcgagtgtgcgtcccccacatatgcaattc
tacccaccatatcatccacaatatgggtatatgccgcctcccgtgcttccaccttggcag
caataccctcagccatatccaccaccgcggcctcctttacctcatcccgatggtgaccaa
gtatcttttaatccgaaagctccgactggggctccccaacaatcataa
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