Henckelia pumila: 140890947
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Entry
140890947 CDS
T11037
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
hpum Henckelia pumila
Pathway
hpum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140890947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140890947
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
140890947
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
140890947
NCBI-ProteinID:
XP_073155228
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All DBs
Position
3:complement(47768758..47771337)
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AA seq
654 aa
AA seq
DB search
MKEETERAVVVPLIQRATNSTAAEVDPRLLRAIKSSVRSSDSQLRCAAQTLISLMKRDHS
QVRYLALLIIDELFMRSKLFRTLMVENLDQLLSLSIGFRRNLPLPAPTSVASVLRSKAIE
FLEKWNVTFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIQLERKEREMRTKEILLKKF
ESLKTNMSLIKEEIQSTVDEIGECLDILKTEDEDIPFAIIDGEEIQEFHNSELRQIRHDS
LIEGEKIQENSENKIVFDAVRELYKVLVTKHLAGIQEWLSVLIRVDVADNRFRDSTLKEF
IDIRNLIQLTKDKCEESGCALPNIANTEEEDIWEDGTLQTLEKGYSVFDRSKGNDFPVAS
TTNDAKGIECRNKVSNKSIIDGCDSSRSKSNPARGKLLDEAPVITWGSFLDNWGSNRDVL
ANHRGLDLEGHWGRVDYDAVIPAEKIAELNVRASVYKEEPVEIQPCKAPLRNGQLCQRRD
LRVCPFHGLVIPRDDEGNPISGSSIVEETDPQNQSVEMTPYVDSDKVKQLLKQAVQNVRE
RDREESKKRHSDKQALKRAKLAEVRAHNEAVLRDAAIASTSRSSHIGEDMEIGSGSKSSA
RIKKQTLASMLKKKDTAKVRLGQRLLNTRARESTIRQLTESEDANYREAFPNQW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaaacggaaagggcggtggtggtgccgttgattcagagagccaccaactcc
acggcggcggaggttgatccccgactcctcagggccatcaaatcctcggtccggtcatcc
gactcccagctccgatgcgccgcccaaaccctaatatcgcttatgaaacgtgaccattct
caggtaagatatcttgcacttctcataatagacgagcttttcatgcggtccaaacttttt
agaactcttatggtcgagaacctagatcagttactcagtttgagtattggatttcgaagg
aatttacctctacctgcacctacttctgttgcatctgttctgcggtcaaaggccatcgag
tttttagaaaagtggaatgtcacatttggtattcattacagacagctcaggttggggtac
gactatctcaagaacaccctccgatttcaatttcctaacctgcaagccaatgcagctcgg
attcagctagagaggaaagaaagggagatgagaacaaaagagatcttgcttaaaaaattt
gaatctttgaagactaatatgtctttgattaaagaggaaatacaatcaacagtcgatgag
attggtgaatgcttagatattcttaaaacggaggatgaagatattccatttgctattata
gatggtgaggaaatccaagagtttcataattcagaattacggcagatacgtcatgattct
ttgatagagggggaaaaaattcaggagaatagtgaaaacaaaattgtttttgatgccgtg
agagaactttataaggttttggtgactaagcatctagctggaatacaagaatggctctct
gttcttataagggtggacgtggcagataacaggttcagggattctactttgaaggagttc
atagatattagaaatctcattcaattgactaaggataaatgtgaagaatcaggttgtgca
cttcctaatatagcaaataccgaagaagaagatatctgggaagatggtactttgcaaaca
cttgagaaagggtactctgtttttgatcgttccaaaggcaatgatttccctgttgcatcg
accaccaatgatgcaaaaggcatagaatgccgtaataaagtgtctaacaaaagtatcata
gatggttgtgacagcagtcgaagcaaatcaaaccctgcccgaggtaaactcttggatgaa
gccccagttattacctggggttctttccttgataactggggctcgaaccgggatgtttta
gctaatcataggggattggatcttgaaggtcactggggtagggtagactatgatgcagtt
ataccagcagagaaaatagctgaacttaacgtacgagcatctgtttataaagaagagcct
gttgaaatccaaccatgtaaggcaccattacgaaatggccaactttgtcaaagaagagac
ttgagagtttgtccatttcatggactcgtcatccctagggatgatgaaggaaatccgatc
agtgggagctccatagtagaagagacagatccccagaatcagtcggtagaaatgactccg
tatgtggacagtgataaagtgaagcagctactaaagcaggctgtgcagaatgttagggaa
agagatagagaagaatcaaagaagaggcattcagacaagcaggctttgaagagagcaaag
cttgcagaagttcgagcacacaatgaagccgttcttcgagatgcagcaattgcttcaact
tctagatcctctcatattggagaagacatggaaatcgggagtggttctaaatcttcagct
agaatcaagaagcaaacacttgcatcaatgctgaaaaagaaagatactgctaaagttaga
ttaggtcagaggctattaaacactcgagcaagagaaagcacgataagacagttgacagaa
tcagaggacgccaactatcgggaggcttttccaaatcagtggtag
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