Henckelia pumila: 140891050
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Entry
140891050 CDS
T11037
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hpum Henckelia pumila
Pathway
hpum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140891050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140891050
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140891050
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
140891050
NCBI-ProteinID:
XP_073155390
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Position
3:complement(196399212..196404264)
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AA seq
590 aa
AA seq
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MDPNPKKPNISTPDSAISNGSTHTCWPFPDEVLEKVLSLIDSHKDRNSVSLVCKNWYNAE
RWTRTNLFIGNCYSVSPEIVARRFPRIKSVRLKGKPRFSDFNMLPRDWGADVNPWLVMFA
KVYPFLEELRLKRMTISDESLELLAKSFPGFKALSLSSCDGFSDDGLNAIATYCMNLTEL
NLQDNVTEDIAGGWLSCFPDNFVSLEILNFASLNSEVSFDALERLVSRCKSLRVLKVNES
VNLEQLQRLLELAPQLTELGTGSFMQELTPRQYEDLEISFRNCKDLHVLSGLWEVTSPYF
PALYGACAGLTFLNLSDAALQSVEFSKLLAHCPNLRRLWVVDTVEDKGLEAVGSSCPLLE
ELRVFPADPYDRHHRHGVTDLGFLAVSRGCRKLHYVLYFCRRMTNAAVVAIVQNCPDFTH
FRLCIMNPGQPDYLTNEPMDEAFAAVAKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLETL
SVAFAGSSDWGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYERMRSLWMSACNLTMK
GCMLLARKMPRLNVEVIKDEESDDSQAEKVYVYRSIAGPRQDAPPFVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaccccaagaaacccaatatttcaacaccagattcagctatctcgaatgga
tcaactcacacttgctggccattccctgatgaagtattggaaaaagttctctcactcata
gattcacacaaggacagaaactcagtctccctcgtctgcaagaattggtataatgcagag
aggtggacaaggacaaatctgtttataggcaactgttattctgtatctcctgagattgtg
gctagaaggtttccaagaattaaaagtgtaagactaaaaggaaaacctagattttccgat
ttcaatatgttgcccagagattggggggctgatgtgaatccttggctggtcatgtttgca
aaagtttacccttttttggaggagctaagattaaaaagaatgactattagtgatgagagc
ttggagctcttggctaaatcatttccgggcttcaaggctttatctttgtcaagttgtgat
ggattcagtgatgatgggctcaatgccattgccacttattgcatgaacttgacggagctc
aacttacaggacaatgtaaccgaggacattgctggaggttggctaagttgctttccggat
aacttcgtctcattagaaatactaaattttgctagccttaatagtgaggtaagttttgat
gccctcgagaggcttgttagtcgatgcaaatcattaagagttctgaaggtcaatgagagt
gttaatttggaacaattacaacggctccttgaacttgctccccaattaacggaacttggc
actggctctttcatgcaagaacttacacctcgacaatacgaagatcttgagatttcattt
agaaattgtaaagatctccacgttctttcgggtttatgggaagtcacctctccctatttt
cctgccctttatggagcttgtgctggcctaactttcttaaacttaagtgatgctgctctc
caaagtgttgaattttcaaaacttcttgctcactgccccaatttacgccgcctttgggta
gttgatacggttgaagacaaaggacttgaggccgttggatccagctgccccttactcgaa
gaactccgagtcttccctgctgatccttatgacaggcatcatcgccatggggtgacagat
ttgggattcttggccgtctctcgtggatgtcgcaaactccactatgtcctttacttttgc
cgcaggatgactaatgctgctgttgtggccatagtccagaactgccccgactttacccat
ttccgtctttgcataatgaatccaggccagccagattaccttacaaatgaacctatggat
gaagcatttgcagctgtggctaaaacttgcactaaacttcaaaggctatcggtttccggc
cttctgactgatcttacattcgagtatattgggaaatatgccaaaaatcttgagactctt
tccgtggcttttgctggcagcagtgattggggaatgcagtgtgttttagaaggttgtcca
aagttaagaaagctcgagataagagattgcccatttggtaatgctgcgcttctatctggg
ctcgagaaatacgagagaatgcggtctctgtggatgtctgcctgtaatttaaccatgaag
gggtgcatgctgctagcaaggaagatgccaagattgaatgttgaagtaatcaaagacgag
gaaagtgatgacagtcaagctgagaaagtttacgtgtatcgttccatagcagggccaaga
caggatgctcctccttttgttctcactctttga
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