Henckelia pumila: 140891182
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Entry
140891182 CDS
T11037
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140891182
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140891182
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
90S particles
Helicases
140891182
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ParD_antitoxin
P-loop_SecA
SLAM
AAA_19
Motif
Other DBs
NCBI-GeneID:
140891182
NCBI-ProteinID:
XP_073155633
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Position
3:19431527..19436608
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AA seq
527 aa
AA seq
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MEKDGSFLFSGIKFNRQKFSSDFARFKVKKEDDGIVEKLNVIENGDITTTEEATKPRAEK
KRKRKAIVSDPVEGFNVFKRSKSRAEVGDGKEEEIILRKKEYHRRLERESLFRKKHNIHV
SGRNIPSPLLNFMELRSRYNCKPYVLRNLADLGFEEPTPIQRQTIPVMLSGRECFACAPT
GSGKTFAFVCPILMQLQRASKDGVRAVILCPTRELAAQTARECKKLSRGKKFYIKLMTKQ
LAKSADFSKLPCDILISTPFRAQFAIRKRKLDLSKVEFLVLDESDKLFELGLVEQVDAVV
KACSNPSIVRSLFSATLPDTVEELARTIMHDAVRVIIGRKNSASESIKQKLIFVGSEEGK
LLALRQSFAESLNPPVLIFVQNKERAKELYDELKYDDVRADVIHADLSEIQRESAVDNFR
SGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRCGEAITLYTEA
DVPFLRNVANVMTASGCEVPAWITSLQKKKWRKHRPQRESISKPEVE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacggctcattcctgttctccggcatcaagttcaatcgccagaaattttcc
agtgattttgctagatttaaggtgaaaaaggaggatgatggtattgtagagaagcttaat
gtaattgaaaatggggatattactacaacggaggaagccacgaaaccacgtgctgagaag
aagagaaaaagaaaagctattgtttcagatccagttgaaggcttcaatgtgtttaaacgt
tccaaatcgagagctgaagtaggggacgggaaggaagaggaaattatactcagaaagaag
gagtatcatcgtcgattggagagggaatccctttttcggaagaagcataatattcatgtt
tctgggagaaatattccatcacctcttctgaacttcatggagttgcgatcaaggtataat
tgcaaaccatacgtactgcgcaatttggccgatctgggttttgaagaaccaacacccatc
caaaggcagactattccagtcatgttatctggaagagagtgtttcgcttgtgctcctact
ggttctggaaaaacctttgcatttgtctgcccaatacttatgcaacttcagcgtgcttca
aaggatggtgttcgggcagtgattctttgccccactcgtgaattagctgctcagacagca
agagaatgcaagaagttgtcgagaggaaagaaattttacattaaattaatgaccaaacaa
ctcgctaaaagtgctgatttttcaaaattgccctgtgatattctcatatctacacctttt
cgagcgcagtttgctattcgcaaaagaaaacttgatttgagcaaggttgagtttcttgtc
ctggatgaatctgacaagctttttgagttaggcttggttgagcaggttgatgcagtggtc
aaagcatgctcaaatccttctattgtacgctcactgttcagtgctactttacctgatact
gttgaagagctagcacgcacaattatgcatgatgctgtccgagttatcattggcagaaag
aactctgcttctgaatcaatcaagcaaaagctcatatttgtaggaagtgaggagggcaag
cttcttgctctccgtcaaagctttgcagagagtttgaacccacctgtgttaatttttgtc
caaaacaaagaacgagctaaggaattatatgatgagctgaaatatgacgatgttcgagct
gatgtcatacatgccgatctttctgaaatacagagagaaagtgcagttgacaactttcga
tccggaaaaacgtgggttttgattgccactgatgttattgcccgtggaatggactttaaa
ggcgtcaactgtgtgatcaactatgattttccggattcggctgctgcatacattcacagg
attggtcgttcgggtagggctggaagatgcggagaagcgataaccttatacactgaagct
gacgttccattcttaaggaatgtagctaatgtaatgacagcttctgggtgtgaagtcccg
gcttggataacttctctacagaagaaaaaatggaggaaacacaggccccaaagggaatca
atttctaaacctgaagttgagtaa
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