Henckelia pumila: 140891365
Help
Entry
140891365 CDS
T11037
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140891365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140891365
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140891365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
140891365
NCBI-ProteinID:
XP_073155925
LinkDB
All DBs
Position
3:63953860..63957417
Genome browser
AA seq
256 aa
AA seq
DB search
MSGKPSSTAVTYSPSLTNFRKKKTLNIAGSDWVRSDGRRIHQCRPAFLRTGAVSSASGSA
YAEFGNTKVIVSVFGPRESKKAMLYSDMGRLNCNVSYTTFATPIRGQAHETKDLSSTLHK
ALEGAIILKSFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDMVTSVSVSLF
GKDFLIDPISDEESYRDGTLMITFMPSRNEVTQMTVTGEWSTPKIHEAMQLCLDACSKLG
KIMRYCLKDAASGTLD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaagccaagctctacggcggtgacgtattcgccgtcgctgacgaattttagg
aagaagaagaccttgaatatcgcgggttctgattgggtacgttccgacggccgccgcatc
caccagtgccgccctgcatttctaaggaccggtgcggtgagttctgcctcggggtctgct
tatgcagagtttggaaacacaaaggtcattgtatctgtatttggccctagagaaagtaag
aaagcaatgctgtacagtgacatggggagactgaattgtaatgtcagctatactactttt
gctacacccattcgtggccaggcacatgagactaaagatctgtcgtcaacactccacaaa
gctctcgagggtgctattatactgaaatctttccccaagacaactgttgatgtttttgcg
ttggtcttggaatccggaggaagcgatctcccagtagtaatatcgtgtgccagtcttgct
ctagcagatgccggcatcatgttatatgacatggttacctctgtatcagtgtcattattt
gggaaggactttcttatcgaccccatttcagacgaggaaagttaccgagatggcactcta
atgattacatttatgccatcgcgtaatgaggttactcaaatgactgtcacaggagaatgg
tcgacaccaaagatccacgaggcaatgcagttatgccttgatgcttgctccaagctaggg
aagataatgaggtattgtctaaaggatgctgcttctggtacactggattag
DBGET
integrated database retrieval system
