KEGG   Henckelia pumila: 140891542
Entry
140891542         CDS       T11037                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hpum  Henckelia pumila
Pathway
hpum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140891542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpum03019]
    140891542
   03041 Spliceosome [BR:hpum03041]
    140891542
Messenger RNA biogenesis [BR:hpum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140891542
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140891542
Spliceosome [BR:hpum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140891542
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 RRM_PARP14_3
Other DBs
NCBI-GeneID: 140891542
NCBI-ProteinID: XP_073156170
LinkDB
Position
3:147857082..147860174
AA seq 332 aa
MEEMKKRKLEEIGNGQMLPNLNETAASSIVDELRALLDPLAKPQLVDLLSKAGSQYPSIA
EEIRSVASADPALRKLFVRGLAWNTSSETLCDAFQEHGEIEEGAVIHDKVTGKSRCYGFI
TFKDMESAQRALRAPGKMIDGRMAACNLASEGLNSSTSTLDQAQRKLYVGGLSPETSSEM
LLSYFGRHGEIEEGSVAYDKDSNKSRGFGFVTFKTMEAAKEALDDPQKILGGRNITVKLA
DNYKGKVTPAGVVLGPGHMTAGYQQKAYSETGAPIGYSYPQPMASFGSYTNPSAAAAYSA
QPQYSYPQFAVRKDTSPSPTAYGGYPYYMPKQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atggaagagatgaagaagaggaagcttgaggaaatcgggaacgggcagatgttgccgaac
ttaaatgaaaccgctgcgtcttcaatcgttgatgaattgcgtgcgctcctcgacccgctc
gctaagccgcagcttgtcgatctcctatctaaagcagggtcacaatatccttctattgct
gaagaaattagaagtgttgcaagtgctgatcctgcccttcgaaagctttttgttcgtggt
ttagcatggaatacttcttcagaaactttgtgtgatgcatttcaagaacatggtgagatc
gaagagggtgctgtaatccatgacaaagtaactggaaagtctcgttgttatggtttcatc
acctttaaagatatggaatcagctcagagagcacttagagcacctggcaagatgattgac
gggcgtatggctgcttgtaaccttgcaagtgagggattgaacagcagcacttctactctt
gatcaagcccaaaggaagctttatgtaggaggtttgtcacctgaaacatctagtgaaatg
ttgctttcctatttcggaagacatggtgagatagaggagggttctgttgcatatgataaa
gactcgaacaaatcacgtggctttggctttgttactttcaagaccatggaggcggcgaag
gaagctttagatgacccccaaaagatacttggaggaagaaatatcacagtgaagcttgct
gataattacaaaggcaaggtgactccagctggtgtggttctgggtccaggacacatgact
gctggctatcaacagaaagcatattctgagactggggcccctattggttattcgtatccc
caacctatggcatcgtttggttcctacacgaatccctcagcagctgctgcatactcagct
cagccacagtattcttatcctcaattcgctgttaggaaagatacctcaccatcgcctaca
gcatatggggggtacccttattacatgccgaagcaatag

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