Henckelia pumila: 140891698
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Entry
140891698 CDS
T11037
Name
(RefSeq) sm-like protein LSM7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140891698
09123 Folding, sorting and degradation
03018 RNA degradation
140891698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140891698
03041 Spliceosome [BR:
hpum03041
]
140891698
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140891698
mRNA degradation factors
5'-3' decay
Lsm complex
140891698
Spliceosome [BR:
hpum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140891698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
Motif
Other DBs
NCBI-GeneID:
140891698
NCBI-ProteinID:
XP_073156403
LinkDB
All DBs
Position
3:complement(45453622..45456714)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaacagttttggatttagctaaattcgtggacaaaggtgttcaa
gtcaagctcactggtggaagacaagtaacaggaactctcaaagggtatgaccaattgctg
aatcttgtcctggatgaagcagtagaatttctgagagatcctgatgatccattgaagacc
actgatcaaaccaggcgccttggtttaatagtttgtcgaggaactgctgtgatgcttgtt
tcacccactgatgggacagatgaaatcgccaatccatttgttcagccagatggcgcatag
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