KEGG   Henckelia pumila: 140891698
Entry
140891698         CDS       T11037                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
hpum  Henckelia pumila
Pathway
hpum03018  RNA degradation
hpum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140891698
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140891698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpum03019]
    140891698
   03041 Spliceosome [BR:hpum03041]
    140891698
Messenger RNA biogenesis [BR:hpum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140891698
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     140891698
Spliceosome [BR:hpum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    140891698
SSDB
Motif
Pfam: LSM Hfq RimP_C
Other DBs
NCBI-GeneID: 140891698
NCBI-ProteinID: XP_073156403
LinkDB
Position
3:complement(45453622..45456714)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggcagaaaagaaacagttttggatttagctaaattcgtggacaaaggtgttcaa
gtcaagctcactggtggaagacaagtaacaggaactctcaaagggtatgaccaattgctg
aatcttgtcctggatgaagcagtagaatttctgagagatcctgatgatccattgaagacc
actgatcaaaccaggcgccttggtttaatagtttgtcgaggaactgctgtgatgcttgtt
tcacccactgatgggacagatgaaatcgccaatccatttgttcagccagatggcgcatag

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