Henckelia pumila: 140893039
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Entry
140893039 CDS
T11037
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140893039
03036 Chromosome and associated proteins [BR:
hpum03036
]
140893039
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140893039
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140893039
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140893039
microRNA pathway
RISC loading complex
140893039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
140893039
NCBI-ProteinID:
XP_073158213
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All DBs
Position
3:61301322..61308837
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AA seq
909 aa
AA seq
DB search
MDPSEQDGNGTTESLPPPPPIPENVTPFMAEPGPALNKVIRHPMARPGRGSRGNKVPILT
NHFKVNVKSIDGYFFHYSVALFYEDGRPVDGKGVGRKLLDRVQETYESELAGKVFAYDGE
KSLFTVGPLPRNKLEFTVVLDDAASSRNNGNASPGGHESPNESDKKRIRRSYHSKTFKVE
ISFAAKIPMQAIGNALRGQESENSQEALRVLDIVLRQHAARQGCLLVRQSFFHNDPKNFA
PVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPLVDFLIENQNVKDPFSLDWAK
AKRTLKNLRVKTVPTNQEYKITGLSEKPCREQTFTLKLKARDKDGEPQTTDVTVYDYFVN
HRNIDLRYSADLPCINVGKPKRPTYIPVELCSLVSLQRYTKALTSFQRASLVEKSRQKPQ
ERMSVLSNALKTNNYDSEPMLRSSGVSISSSFTQVEGRILPPPKLKVGNGEEMFTRNGKW
NFNNKKFIDASKIERWAVVNFSARCDVRGLIRDLTRIGEMKGIKVEAPFDVFEENSQFRR
APPLVRVEKMLEEVQSKLPGQPKFLLCLLPERKNCDIYGPWKRKNLSEFGIVTQCLCPMR
VNDQYLTNLLLKINAKLGGLNTSLAGEISSSLPVVSKIPTLILGMDVSHGSPGQSDIPSI
AAVVSSRQWPSVSRYRACVRTQSRKVEMIDSLFKRVSDTEDEGIIRELLVDYYTSSGKRK
PDQIIIFRDGVSESQFNQVLNIELNQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNS
PENVPPGTVIDNTICHPKNYDFYLCAHAGMIGTSRPTHYHVLLDQVGFSADDLQELVHSL
SYVYQRSTTAISVVAPICYAHLAASQLGTWMKFEEISETSSSHNGGSAAPAVPPMPKLQE
NVRNSMFFV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctgaacaagatggtaatggaactacagaatctctaccaccacctcctcct
attcccgaaaacgttactccattcatggctgaaccgggaccagcgttgaacaaggttata
cgtcatccaatggccagacctggccgaggaagcagagggaataaggttcctattctaacc
aaccacttcaaagtgaatgtcaaaagcattgacggctacttctttcactacagtgttgcc
ctcttctatgaggatggacgtcctgttgatggtaagggtgttgggcggaagctacttgac
cgagttcaggagacttacgaatcagagttggctggtaaggtatttgcttatgatggagag
aagagtctcttcaccgtcggcccacttccgaggaacaaactcgagtttactgttgtgctt
gatgatgcggcgtcaagtcggaacaatggcaatgccagccctggagggcatgaaagtccc
aacgaaagtgacaagaaaaggatcaggcgttcctaccattcgaaaacctttaaagtggag
ataagttttgcggccaaaattcctatgcaggccatagggaatgctttacgtggccaggaa
tctgaaaattcacaagaagccttgcgggttttggatattgttttgagacaacatgcagca
aggcagggttgcttgttggttcgtcagtcttttttccacaacgatcctaaaaactttgct
cctgtgggtggtggtgtcctcggttgccgaggatttcattcaagcttccgggccacccag
agtggcttgtctttgaacattgatgtgtctaccaccatgatcatccaacctgggcctctg
gtggattttctcattgaaaaccaaaatgtgaaagatcccttctctcttgactgggcgaag
gcgaaacgcacccttaagaatttaagggtgaagaccgttcctactaaccaagagtacaaa
atcactggtttgagtgagaagccttgcagggagcaaacgttcacattgaagctaaaagct
agggacaaggatggtgaaccacagacaacagatgtgaccgtctatgactactttgtcaac
cacaggaacattgatttacgttattcggctgatttgccatgcattaatgtcggaaagcca
aaacgaccaacatatatcccagttgagctttgttccctggtgtcattgcaacgttacaca
aaagctcttacctcctttcaaagagcttctctagtggaaaaatcacggcagaagccacaa
gagaggatgtcggttctgagtaatgctttgaagaccaataattatgattcagaaccaatg
cttcgttctagcggagtttctatttcaagtagctttactcaggttgaagggcgaattctg
ccaccccccaagctgaaagtcggtaatggagaagagatgtttactcgcaatggaaagtgg
aattttaataataagaaatttattgatgcgagtaagatagaacgctgggctgttgtgaac
ttctcagcacgctgtgacgtacgcggcctgatcagagatttgaccagaattggcgaaatg
aaaggaattaaagtggaagctccgtttgatgtttttgaagaaaattcgcagttccgacgt
gctccaccccttgtcagggtggagaaaatgttggaagaggtgcagtcaaagcttcctgga
caaccaaagttccttctctgcttgcttccagagcggaaaaactgtgatatctatggccca
tggaagcggaaaaatttgtcagaatttggaattgttactcagtgtctctgccccatgcga
gtaaacgaccaatatctaacaaatctattgctaaagataaatgcaaagctcggtggtttg
aacactagtttggctggtgaaatatcatcttctcttccagtggtatctaagattcccact
ctgattctggggatggatgtatcacatggctcacctgggcaatctgatatcccatctatt
gctgcggttgttagctcgaggcaatggccttcggtttctcgttatagagcatgtgtccgc
actcaatctcgaaaggttgaaatgatagattccctattcaagcgtgtgtcagacactgaa
gatgaaggcataattagagaacttctggtggattactacaccagctctgggaaaaggaag
cccgaccaaattatcatattcagagatggtgtcagtgaatcacagttcaatcaagtccta
aacatcgagctgaaccaaatcattgaggcatgcaagtttcttgatgagaaatggtctccc
aaatttgtggtaattgttgcacagaaaaatcatcacactaagtttttccagcctaattct
ccagagaatgtcccccctgggacggtgattgataacacaatttgtcatcccaagaactat
gatttttacttgtgcgcacatgctggaatgattggtacgtccagaccaacccactatcat
gttctcttagatcaggttggtttctccgctgatgatttgcaggaactcgttcactcactg
tcctacgtgtaccagcgtagcacaactgctatatctgttgttgcacctatatgctatgcg
cacttggcagcctctcagttggggacttggatgaagtttgaagagatatcagagacatct
tctagtcacaatggtggttctgcagctccagctgttccaccgatgcctaagctacaggag
aatgttcgcaactcgatgttttttgtataa
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