Henckelia pumila: 140894394
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Entry
140894394 CDS
T11037
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140894394
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140894394
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
Pre-60S particles
Helicases
140894394
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
140894394
NCBI-ProteinID:
XP_073159002
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Position
4:complement(21307165..21314661)
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AA seq
813 aa
AA seq
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MASESPDTKKAKRSSRKRRLRDSDQKLERLNSLPWSSSLPETNDSIDDPFSLFIGSNELE
GGFLALEEIDESEYGLEIPKIEVGNVKKQVSDKRKRNKRKNNERNDDAMFDGETVGERDG
ENDGAKEEDGKRQGKLGKTKKNVKKMKIEYQKNDREDEAVEKTAANDGKDSFEEDSVDED
EYSSWNELRLHPLLMKAIYKLKFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL
PILQRLLEEQEKVERRSEKKGEANERIAPRGVMRALIVTPTRELALQVTDHIKEVAKGTI
FRVVPIVGGMSTEKQERLLKARPEIVVGTPGRLWELMSGGEIHLVELHSLSFFVLDEADR
MIESGHFRELQSIVDMLPTNRESTANQSENTQSCTTLSSLQRKKRQTFVFSATLALSADF
RKKLKRGSLTSKKEDLNSMETLSERAGMGENTAIVDLTNASILANKLMESVVECREEEKD
AYLYYILSIHGQGRTIVFCTSISALRRISSLLRILGVNVWNLHSEMQQRARLKAVDRFRA
NEHSILVATDAAARGLDFPGVRTIIHYQLPLSAEVYVHRCGRTARAFNDGCSIVLISPSD
ASKFAALCKSFSKESFQRFPVEVSYMPEIMKRSSLAQKIDKIARKDSQEKAEKSWLERNA
ESIELVLDDNDSEDERMNKYRQKKATSNQLKKLQQELNSLLSRPLQPKTFPKRFLAGAGV
SPLLQHQFEELAKQKICGPSNIVQSKRQLVVIGQDCVEPLQALRSASKEASLDLKEIAEK
HKSMDNSRKRRKEMKKRMHDQQRKQRRKLRQGS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgaatctcccgacacaaagaaagccaagcggagctcgaggaagagacgcctg
agggattcggaccagaaattggaacgtttgaactcacttccatggagttcttcgcttcca
gagactaatgatagcattgacgatcctttctctctcttcatcggttccaacgagcttgag
ggaggatttcttgctcttgaagagattgatgaatcagaatacgggttggaaattccaaag
atcgaagtgggaaatgtgaagaaacaggtaagcgataaaaggaaaagaaataagagaaaa
aataatgaaagaaatgatgatgctatgtttgacggtgagactgttggtgaacgtgatggt
gaaaatgacggtgccaaagaggaggatggtaaaaggcaaggaaaattgggaaaaacgaag
aagaatgtgaagaaaatgaaaattgagtatcagaagaatgacagagaagatgaagctgtg
gaaaaaacagctgctaatgatggaaaggatagttttgaagaggattcagttgatgaagat
gaatattcctcgtggaatgaattgagacttcatcccttattaatgaaagcaatatacaag
ctcaaattcaaggagcctacaccaatacagaaagcttgtattcctgctgctgctcatcaa
ggcaaggatgtaattggggctgcagagacaggatcagggaagacgcttgcctttggtttg
ccaattttacaacggcttctcgaagaacaggaaaaagtggaaaggcgctcggagaaaaaa
ggagaagccaatgagagaattgctccacgtggtgttatgcgtgctctaatcgttaccccc
acgagagagcttgctcttcaggtcaccgatcatatcaaggaagtagcaaaaggaaccata
ttcagggttgtccctattgttggtggaatgtcaacagagaagcaagaaagacttcttaaa
gcaaggcctgaaattgttgttggaactcctgggagactgtgggagcttatgtccggggga
gagattcatcttgtggagctgcactccttgtcattttttgttttagatgaggctgatcgc
atgatagaaagtggccattttcgtgagttacaatccattgttgatatgcttcccacgaat
agggaatcgactgcgaatcagtctgagaatactcagagctgcacgacactttcgagcctc
caaagaaagaaaaggcaaacctttgtgttttctgcaactcttgctctatcagctgatttt
cggaagaaattaaaacgtggatctttgacttcaaaaaaagaagaccttaattcaatggaa
accctttcagaaagagcaggaatgggggaaaacactgcaatagtagatcttacaaatgcc
tccattttggcaaataagctcatggaatccgtagtcgaatgcagggaagaagaaaaggat
gcctacttgtattacattttgagtattcatggacaaggtcgcacaattgtcttctgcact
tcaatatcggcattacgtcgcatttcttcactcttgcgcatcctcggagtcaatgtttgg
aaccttcattcagagatgcagcagcgagcacgcttaaaggcagttgatcgtttccgtgca
aatgagcatagcatacttgttgctactgatgctgcggcacgaggacttgattttcctggc
gttcgaactattattcattatcagcttccactttctgctgaagtatacgtccatagatgt
ggaagaacagctagagcttttaatgatggttgcagcattgttctaatctcaccgagtgat
gcatcaaaattcgcagctctgtgcaaatcattttcaaaggaaagtttccagcgttttcct
gttgaagtctcatacatgccagaaattatgaagcgatcatctcttgcacagaaaatagac
aaaattgcgcggaaggattcccaggagaaggcagagaaaagttggttggagcgaaatgct
gaatcgattgaactggttttggatgataatgatagtgaggacgaaagaatgaacaaatac
agacaaaagaaagccacatcaaatcaacttaagaagttgcagcaggagctcaactctctg
ctttcgaggccattgcaacctaaaacatttccaaagagatttttggctggggctggtgtc
tcgccacttcttcaacatcaatttgaggaattagcgaaacagaaaatttgtggtccaagt
aatattgtccagagtaagagacagttggtggtcataggtcaggattgcgtggagccactt
caggcattgaggagcgcaagcaaagaggcaagcttggatcttaaagagatcgcagaaaag
cacaagagtatggacaactcgagaaaaaggaggaaagaaatgaaaaaacgtatgcacgat
caacaacgaaagcagaggagaaagctaaggcagggaagttag
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