Henckelia pumila: 140894745
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Entry
140894745 CDS
T11037
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140894745
03036 Chromosome and associated proteins [BR:
hpum03036
]
140894745
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140894745
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
Pre-60S particles
Helicases
140894745
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140894745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Peptidase_S76
Motif
Other DBs
NCBI-GeneID:
140894745
NCBI-ProteinID:
XP_073159444
LinkDB
All DBs
Position
4:148800591..148805353
Genome browser
AA seq
699 aa
AA seq
DB search
MPSIALPESQSSSKMKKLNKAEALSVDGDDFVKQKMKKEKKSTNNTKPISEPGPDDFNSH
IVLKKSKEKKRKALEIEMDDSVEERSETSSEIGEPVNDLGKKKKKMKLNEEEEEENPNAV
KNFRISEPLREALKKKGIESLFPIQAMTFNTIFDGSDLVGRARTGQGKTLAFVLPILESL
TNGPAKASRKAGYGRAPSVLVLLPTRELATQVFSDFEVYGGAIGLNSCCLYGGSPYQPQQ
IQLKRGVDIVVGTPGRIKDHIERGNLDFGALKFRVLDEADEMLRMGFVEDVELILGKVAD
ASKVQTLLFSATVPDWVKKIATKFLKPDKKTADLVGNEKMKASTNVRHIVLPCSSSARSQ
LIPDVISCYSSGGRTIIFTETKDSASTLAGLLPGARALHGDIQQATREVTLSGFRSGKFL
TLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNFS
RIERESGVKFEHISAPQPADIAKVAGADAAEKITEISDSVIPVFKAAAEELLNSSNLSPT
ELLAKALAKAAGYTEIKSRSLLTSMENCVTVLLECGKPIYSQSFAYGVLRRFLPEEKVES
IKGLSLTSNGNGAVFDVAADDLDIFLAGKENAAGVSLEVVKSLPSLQQREQARGVRFGGG
GGRGGSFSDRRNGGFSRRNGGFSNRGGGQGRGRNTGRKW
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgccttctattgctttaccagaatcacagtcttcctccaagatgaagaaattgaacaaa
gctgaagctttgtccgtggatggtgatgatttcgttaagcaaaagatgaagaaagagaaa
aaatccaccaacaatacgaaaccaatctccgagccgggccctgatgattttaattcccat
atcgttctgaaaaagagcaaagagaagaagcggaaagctttggagattgagatggacgat
agcgtggaggagaggagcgagactagctcggagatcggcgaacccgtgaatgatttgggt
aagaagaaaaagaagatgaaattgaacgaggaggaggaggaagagaatcctaacgcggtg
aagaatttccggatttctgagccactgagggaggctttgaagaaaaaggggatcgagtcg
ctgtttcctattcaggcgatgacattcaatactatttttgatggctcagatttggttgga
agggcacgcactggtcagggtaaaacattggcgtttgtgttaccaatattggaatcattg
acaaatggacctgcaaaagcatcacggaaggccggatatggaagggcacctagcgttctt
gtgcttttacccaccagggaattggcaacacaggtattttctgactttgaagtctatggt
ggggcaatagggttgaattcatgttgcttgtatgggggttctccctaccagccacaacag
attcaattgaaaagaggtgtcgatatagttgttggtactccaggtcgcatcaaggatcac
atagagaggggaaatcttgatttcggggctcttaaattccgagtgcttgatgaagctgat
gaaatgttgaggatgggcttcgttgaagatgttgagcttattttaggcaaggtagcagat
gccagtaaagtccagacacttctgtttagtgccactgtaccggactgggtgaagaagatc
gctactaaattcttgaaaccagataagaagactgctgaccttgttggcaatgagaaaatg
aaggctagcaccaatgtgagacatattgttcttccttgttcaagttctgccaggtcacag
cttattccagatgtcattagttgctacagtagtggaggacgcactattattttcacggag
acaaaggattccgcgtcaacacttgctggattactgcctggagctcgtgctttgcatggt
gacatacaacaggccacacgtgaggtcacactctctggatttaggtcaggcaagttttta
acactcgttgctaccaatgttgcagcacgtggattggatattgatgatgtccagttaatc
attcagtgtgagcctcctcgtgatgtagaggcatacattcatcgatctggaagaacaggg
agagcgggcaaatctggtgttgctgtaatgctgtatgatcccaggaaatcaaacttttct
aggattgaaagagaatcaggtgtcaaattcgaacacatttctgctccacagccagcagat
atagctaaagttgctggtgcagatgctgctgaaaaaattactgagatctctgatagtgtc
attccagttttcaaagctgctgctgaagagctgctgaattcatctaatttatcaccaaca
gaactacttgctaaggcactggccaaggctgctggttatactgagatcaagagtcgatcg
ctgctcacttcaatggagaactgtgtcactgttctccttgaatgtggaaagcccatttac
tcgcagtcttttgcatatggggttctacggagatttttgcctgaagagaaggtcgagtca
attaaaggactttctttaacatctaatgggaatggtgcagtgtttgatgtggctgctgat
gacctggacattttccttgctggtaaggagaatgccgctggagtgagtttagaggtggtg
aaatctttgccaagtttgcaacaaagagaacaggcaagaggcgtaagatttggaggaggt
ggtggccgaggaggcagcttctcagataggagaaatggtggattttctaggagaaatggt
ggattttccaatagaggtggaggacaaggtcggggaagaaatactggccgcaaatggtga
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