Henckelia pumila: 73952684
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Entry
73952684 CDS
T11037
Symbol
rpoA, NQX89_pgp036
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpum Henckelia pumila
Pathway
hpum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
73952684 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
73952684 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpum03400
]
73952684 (rpoA)
Enzymes [BR:
hpum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
73952684 (rpoA)
Transcription machinery [BR:
hpum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
73952684 (rpoA)
DNA repair and recombination proteins [BR:
hpum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
73952684 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
GSDH
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
73952684
NCBI-ProteinID:
YP_010446886
LinkDB
All DBs
Position
Pltd:complement(78240..79301)
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AA seq
353 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVELRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQD
IILPPYVEIVDNTQHIASLIEPIPFCIRLEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR
NVNHSIHSYGNRNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDKKEENIPLE
DNQHMVPLSQFTFQNKLDKLRKNKKRIALKSIFIDQYELSPRVYNCLKRSNIYTLLDLLN
NSQEDLMKIEHFHLEDVKQILGILEKHFAVDLPKKRFSICSTIDVFERDSESY
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacaatggaaatgtgttgaatta
agaacagacagtaaacgtctctattatgggcgctttattctctctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaacgtcccgcatgaatattctacaataacgggtatt
caagaatcggtccatgagattttaatgaatttgaaagaaattgtattgagaagtaatcta
tatggcacttgtgaagcgtctatttgtgtcagaggtcctggatatgtaactgctcaagat
atcatcttaccgccttatgtagaaatcgtcgataatacacaacatatagctagcttgatc
gaaccaattcctttttgtattagattagaaatcgagagaaatcgtggatatcttataaaa
atgccacataactttcaagatggaagttatcctatcgatgctgtattcatgcctgttcga
aatgtgaatcatagtattcattcctatgggaatcggaatgaaaaacaagagatactgttt
ctagaaatatggacaaatgggagtttaactccgaaagaagcacttcatgaagcctcccgg
aatttgattgatttatttattccctttttagataagaaagaagaaaacatacctttagag
gacaatcaacatatggttcctttatcacaatttacctttcagaataaattggataaactc
agaaaaaacaaaaaaagaatagcattgaaatcgatttttattgaccaatacgaattgtct
cccagggtctataattgcctcaaaaggtccaatatatatacattattggaccttttgaat
aacagtcaagaagatcttatgaaaattgagcattttcacctagaagatgtaaaacagata
ttgggcattctagaaaaacatttcgcagttgatttaccaaaaaagaggttttcgatctgt
agcacaattgatgtattcgaaagagattcagaatcttattga
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