Helicobacter pylori v225d: HPV225_0003
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Entry
HPV225_0003 CDS
T01899
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00540
Lipopolysaccharide biosynthesis
hpv01100
Metabolic pathways
hpv01250
Biosynthesis of nucleotide sugars
Module
hpv_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPV225_0003 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpv01005
]
HPV225_0003 (kdsA)
Enzymes [BR:
hpv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HPV225_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hpv01005
]
Lipid A
HPV225_0003 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
ADI34113
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All DBs
Position
complement(899..1729)
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AA seq
276 aa
AA seq
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MKTSKTKTPKPVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASAAAKVADILQIPAFLCRQTDLIVEV
SQTNAIINIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHVDPKNALSDGANMLKPDELEHLVADMLKIQNLF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttctaaaacaaaaacccctaaacccgttttaatcgctggcccatgcgtcatt
gagagcttagaaaatctaagaagtatcgctactaaattacaacccctagccaacaacgag
cggttggatttttattttaaagcgagttttgataaggcgaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcttagaaatgttacaaaccatcaaagatgaattt
ggctataaaattttaaccgatgtgcatgagagctatcaagcaagcgcagcggccaaagta
gcggatattttacaaatcccggcgtttttgtgccgccaaacggatctgattgtagaagtg
agccaaactaacgctattatcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattccgttctaaaagcccttaaaacgagagatagtagcattcaaagccccacttat
gaaacagcgttaaaaaatggcgtgtggttgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgttctttaaaaatcatgcgagagtttgcccctgtgattttt
gacgctactcatagcgtgcaaatgccagggggagcgaacgggaaaagttcaggcgatagc
tcttttgcccctattttagccagagcggcggcggcggttgggattgatgggttgttcgct
gagacgcatgttgatcctaaaaacgccctaagcgacggagcgaacatgctaaaacctgac
gagctagaacatttagtagccgacatgttaaaaatccaaaatttattttaa
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