Helicobacter pylori v225d: HPV225_0198
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Entry
HPV225_0198 CDS
T01899
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPV225_0198 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpv01007
]
HPV225_0198 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpv03016
]
HPV225_0198 (lysS)
Enzymes [BR:
hpv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HPV225_0198 (lysS)
Amino acid related enzymes [BR:
hpv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPV225_0198 (lysS)
Transfer RNA biogenesis [BR:
hpv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPV225_0198 (lysS)
Prokaryotic type
Other AARSs
HPV225_0198 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADI34294
LinkDB
All DBs
Position
177598..179103
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AA seq
501 aa
AA seq
DB search
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESI
VGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKI
IYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQGIKVEPNLTYGKLLA
EAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaccaatacatccaacaacgcatccataaagccaacagcttgagagaagaa
gggaaaaacccttataaaaatggcttgaaacgaagccttacaaacgccgcttttttagaa
aaatacgcttatgttaaggatttagaagagcctaaagacaaggaaaaatgcgagagtatt
gtagggagggtcaagcttttgcgcttaatgggtaaggcttgttttattaaaattgaagat
gaaagcgcgattttgcaagcttatgtttcgcaaaatgaattgaatgatgaatttaaaagc
ctgaaaaagcatttagaagtgggcgatattgtgttggtgaaaggtttcccttttgctacc
aaaaccggtgaattgagcgttcatgcattagaatttcatattttaagcaaaaccattgtg
cctttgcctgaaaaattccatggactgagcgatatagaattgcgttaccgccagcgctat
ttggatttgatagtcaatcctagcgttaaagatgtgtttaaaaaacgcagtttgattgtt
tctagcgtgcggaaattctttgaaatggaagggtttttagaagtggaaacccccatgatg
caccccattcctggcggggcgaacgcaaggccttttatcacttaccataacgctttagaa
attgaaaggtatttaagaatcgctccagaattatacctcaaacgcttgattgtggggggt
tttgaagcggtgtttgaaatcaatcgcaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatttgatt
gaactcagtaagaggctgtttgactacttgctaaagactttgaacttaccttcaaaaatc
atttataacgatatggaagtggatttcaaccaaacgagcgtgatttcctatttggacgct
ttagaaacgatagggggcattagtaaggatattttagaaaaagaagacaggcttttggct
tatttgttagaacaaggcatcaaagtagagccaaatctcacttatggcaaattgctcgct
gaagcgtttgatcattttgtagagcaccagctcattaaccccacttttgtaacccaatac
cccattgagattagccctttagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgtttattgcaggaaaagaaatcgctaacggctttagcgagttgaacgatcct
ttagatcaattagaacgctttaaaaatcaagtggctgaaaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattatgtgtgggcgttagcccatggaatgccccccactgca
gggcaaggcataggcattgatagattagtgatgctactcactggagctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgtggagagtgaa
gaataa
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