Helicobacter pylori v225d: HPV225_0199
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Entry
HPV225_0199 CDS
T01899
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00260
Glycine, serine and threonine metabolism
hpv00460
Cyanoamino acid metabolism
hpv00630
Glyoxylate and dicarboxylate metabolism
hpv00670
One carbon pool by folate
hpv00680
Methane metabolism
hpv01100
Metabolic pathways
hpv01110
Biosynthesis of secondary metabolites
hpv01120
Microbial metabolism in diverse environments
hpv01200
Carbon metabolism
hpv01230
Biosynthesis of amino acids
hpv01240
Biosynthesis of cofactors
hpv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPV225_0199
09102 Energy metabolism
00680 Methane metabolism
HPV225_0199
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPV225_0199
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPV225_0199
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPV225_0199
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPV225_0199
Enzymes [BR:
hpv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPV225_0199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
HrcA
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADI34295
LinkDB
All DBs
Position
179103..180353
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AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYKEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVAGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADLALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttgggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagcttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattataaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcatcgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggagcgttactattaggcgatatagcccat
gtggcagggcttgtggtagccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcgcaattagtgaaatctaacatgcaagttttggctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagac
aagccttatagcgggaaagacgctgatcttgccttagggaatgccggaattaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtaccaacaacctattttttaa
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