Helicobacter pylori v225d: HPV225_0228
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Entry
HPV225_0228 CDS
T01899
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00300
Lysine biosynthesis
hpv01100
Metabolic pathways
hpv01120
Microbial metabolism in diverse environments
hpv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPV225_0228 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpv01002
]
HPV225_0228 (dapE)
Enzymes [BR:
hpv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HPV225_0228 (dapE)
Peptidases and inhibitors [BR:
hpv01002
]
Metallo peptidases
Family M20
HPV225_0228 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ADI34324
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All DBs
Position
complement(207997..209163)
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AA seq
388 aa
AA seq
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MDALEITQKLISYPTITPKECGIFEYIKSLFPTFKALECGENGVKNLFLYRIFTPPKKHA
EEKHAKKEHAKENVKPLHFCFAGHIDVVPPGNHWQSDPFKPIIKEGFLYGRGAQDMKGGV
GAFLSASLNFNPKTPFMLSVLLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAIVAEPTCEK
VLGDSIKIGRRGSINGKLILKGTQGHVAYPQKCQNPIDALASVLPLISGVHLDDGDEYFD
PSKLVITNLHAGLGANNVTPASVEIIFNARHSLKTTKESLKEYLEKVLKNAPHALELESS
SSPFITDSHSKLASVLKENILKTCHNTPLLNTKGGTSDARFFSAHGIEVVEFGVINDRIH
AIDERVSLKELELLEKVFLGVLEDLSEK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttagaaatcacccaaaagctcatcagctaccccaccatcacgcccaaagaa
tgcggtatttttgaatacattaaatcgctttttcctacttttaaagctctagagtgtgga
gaaaatggcgtgaaaaacctttttttataccgcatttttaccccccccaaaaagcatgca
gaagaaaagcatgcaaaaaaagagcatgcaaaagaaaatgttaagcccttgcatttttgc
tttgcagggcatattgatgtcgtgcctcctggaaatcattggcaaagcgatccctttaaa
cccattattaaagaggggtttttatacggccgtggggcgcaagacatgaaagggggcgtg
ggggcgtttttgagcgcgagtttaaattttaaccctaaaacccccttcatgctttctgtt
ttactcacaagcgatgaagaagggccaggaatttttggcactaggcttatgttagaaaaa
ctcaaagaaaaagatttgctccctcacatggcgattgtggctgaacccacttgcgaaaaa
gtcctaggcgatagcatcaaaatcggccgaagaggctctattaatggcaaactcatttta
aaaggcactcaagggcatgtagcttacccgcaaaaatgccaaaaccccattgatgcgctc
gcttctgttttgcccttgatttcaggagtccatttagacgatggcgatgaatattttgac
ccttcaaaattggttatcaccaacttgcatgcagggttaggagcgaataatgtaacgccc
gcaagcgtagaaattatctttaatgcgcgccattctttaaaaaccaccaaagagagtttg
aaagaatatttagaaaaggttttaaaaaacgcgcctcacgctttagaattagaatcaagc
agttcgcctttcatcacggattctcattcaaagcttgccagcgttttaaaagaaaatatt
ttaaagacatgccataacaccccccttttaaacaccaaaggcggcacgagcgatgcgcgg
ttttttagcgctcatggcatagaagtggtggaatttggcgttattaatgacagaatccat
gccattgatgaaagggtgagcttgaaagaattagagcttttagaaaaagtgtttttgggg
gttttagaggatttaagcgagaaatag
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