Helicobacter pylori v225d: HPV225_0552
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Entry
HPV225_0552 CDS
T01899
Name
(GenBank) Cytotoxicity-associated immunodominant antigen
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hpv
Helicobacter pylori v225d
Module
hpv_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
FliT
Motif
Other DBs
NCBI-ProteinID:
ADI34634
LinkDB
All DBs
Position
530126..533629
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AA seq
1167 aa
AA seq
DB search
MANETINQTKKPDQTPSQTAFNPQQFISNLQVAFIKLDSAVASFDPDQKPIVDKNDRDNR
QAFNVISQLREEYANKAIKNPTKKNQYFSDFIDKSNDLINKDNLIDIDSSTKSFEKFGAQ
RYQIFMNWVSHQKDPSKINTQKIRNFMENIIQPPISDDKEKAEFLRSAKQSFAGIIIGNQ
IRSDEKFMGVFDESLKERQEAEKNGEPAGGDWLDIFLSFVFNKEQSSDLKETLNQEPRPN
VEQNVASTPTHIQGLPPEARDLLDERGDFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIH
NNALSSMLMGSHSSIEPEKVSLLYGDNGGPEARHDWNATVGYKNQQGNNVATLINAHLKN
GSGLVIAGNGNGINNPSFYLYKTDQLTGLEQALSQEEIQNKVDFMELLAQNNARLDNLSE
EEKEKFQTEIGNFQKDPKAYLDSLGNDRIAFVSKKDQKHLALVTEFGNGELSYTLKDYGK
KQDRALDRETKTTLQGNLKHDGVMFVNYSNFKYTNASKSPDEGIGATNGVSHLEANFSKV
AVFNLPDLNGLAISSFARRNLEDKLIAKGLPPKDANKIIKDFLNSNKELLEKALDFNKAV
AEAKNTGNYDGVKKAQKDLEKSIRKRERLEQEITKKFENKSGNKNKMEAKVQANSQKDGI
FKLINEEAHKEARIAAYAQNLKGIRRELSDKIENINKNLKDFDKSFDALKSGKNKDFSKA
EETLKALESSVKDLGINPEWISKVENLNAALNEFENGKNKDFSKVTQAKSDLENSIKDVL
INQEITDKVDNLNQAVLTAKAIGDFSGVEQALAELKNFSTNQKSDLQKSVKNGVNGTLVG
NGLSKTEATTLTKKFSDIKKELNEKFANFNNNNNGLKNSTEPIYAKVNKKKTGQVASPEE
SIYTQVAKQVNAKIDQLNKIASASKGVGDFSGLGQSDSSEPIYATIDDLGGPFPLSRLGR
SDSPEPIYATIDLSKVGLSREQELTQKIGNLTQKIGNLNQAVSEAKAGFFGNLEQTMDRL
KDSTKKNVVNLWVESVKVVPASSQAKLDNYATNSHTRINSNVKNGTINEKAIGMLTQKNP
EWLKLVNDKIVAHNVGSAPLSAYDKIGFNQKNMKDYSDSFKFSTKLNNAVKNIKSGFKQL
LTDCISAGSYSPKKAEYGVTKSGFQKS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaccatcaatcaaacaaaaaaaccagatcaaacaccaagccaaacggct
tttaatccacaacaatttatcagtaatcttcaagtggcttttattaaacttgatagtgct
gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacagg
caagcttttaatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat
cccaccaaaaagaatcagtatttttcagactttatcgataagagcaatgatttgatcaac
aaagacaatctcattgatatagattcttccacaaagagctttgaaaaatttggggctcag
cgttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc
caaaaaatccgaaattttatggaaaatatcatacaaccccctatctctgatgataaagaa
aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaa
atccgatcggatgaaaaattcatgggcgtgtttgatgaatctttgaaagagaggcaagaa
gcagaaaaaaatggagagcctgctggtggggattggcttgatatttttttatcgtttgta
tttaacaaagaacaatcttctgatctcaaagaaacgctcaatcaagagccaaggcctaat
gttgaacaaaatgtagcctctacccccacccacatacaaggcttaccgcctgaagctagg
gatttgcttgatgaaaggggtgatttttctaaattcactcttggtgatatggagatgttg
gatgttgagggtgtcgccgacattgatcctaattacaagttcaaccagttattgattcac
aataacgctctgtcttctatgctaatggggagtcatagcagcatagaacctgaaaaagtt
tcattgttgtatggggataatggtggtcctgaagctaggcatgattggaacgccaccgtt
ggttataaaaaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaaaaac
ggcagcgggttagtcatagcgggtaatggaaatgggattaacaaccctagcttctatctc
tacaaaacagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaaaac
aaagtggatttcatggaacttcttgcacaaaacaacgctagattagataacttgagcgag
gaagagaaagaaaagttccaaactgagattggaaatttccaaaaagaccctaaggcttat
ttagactccctagggaatgatcgcattgcttttgtttctaaaaaagaccaaaagcattta
gctttggttactgagtttggtaatggggaattgagctatactctcaaagattatgggaaa
aaacaagatagagctttagatagggagacaaaaaccactcttcaaggtaacctaaagcat
gatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagagtcct
gatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagcaaggtg
gctgtctttaatttgcctgatttaaatggtctcgctatctctagttttgcaaggcggaat
ttagaggataaactgatcgctaaaggattgcccccaaaagacgctaataagatcatcaaa
gactttttgaacagcaacaaggaattgcttgaaaaagctttagacttcaataaagctgta
gctgaagctaaaaatacaggcaattatgacggagtgaaaaaagctcaaaaagatcttgaa
aaatctataaggaaacgagagcgtttagagcaagaaataacgaaaaaatttgagaacaag
agcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatgggatt
tttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctcagaat
cttaaaggcatcaggagggaattgtctgataaaattgaaaatatcaacaagaatttgaaa
gactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaaggca
gaagaaacgctaaaagcccttgaaagctcggtgaaagatttgggtatcaatccagaatgg
atttcaaaagttgaaaaccttaatgcagctttgaatgaattcgaaaatggcaaaaataag
gatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgctc
atcaatcaagagataacggataaagttgacaatctcaatcaggctgtattaacagctaaa
gcgataggcgattttagtggggtagagcaagcgttagccgaactcaaaaacttctcaacg
aatcaaaagtctgatctacaaaaatccgttaaaaatggtgtaaatggaaccctagtcggt
aatgggttatctaaaacagaagccacaacgctcaccaaaaaattttcggacattaagaaa
gaattgaatgagaaatttgcaaatttcaacaacaataataatggactcaaaaacagcaca
gagcccatttacgctaaagttaacaaaaagaaaacaggacaagtagctagccctgaagag
tccatttacactcaagttgctaaacaggtaaatgcaaaaattgaccaactcaacaaaatt
gcatcagcaagtaaaggagtgggcgattttagtggattagggcaatcagatagctctgaa
cccatttacgctacgattgatgatctcggcggacctttccctttgagtagattagggcga
tcagatagccctgaacccatttacgctacaattgatctcagtaaggtagggctttcaagg
gagcaagaattgactcagaaaattggcaatctcactcagaaaattggcaatctcaatcag
gcagtgtcagaagctaaagcaggtttttttggcaacctagaacaaacgatggatagactc
aaagattctacaaaaaagaatgttgtgaatctatgggttgaaagtgtaaaagtagtgcct
gctagttcgcaagcgaaattggacaattacgctactaacagccacacacgcattaatagc
aatgtcaaaaatggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccct
gagtggctcaagctcgtgaatgataagatagttgcgcataatgtgggaagcgctcctttg
tcagcttatgataaaattggattcaaccaaaagaatatgaaagattattctgattcgttc
aagttttccaccaagttgaacaatgccgtaaaaaacattaagtctggctttaagcaactt
ttaaccgattgcatttctgcaggatcttacagcccgaagaaagcggaatatggagttaca
aaaagtggtttccagaaatcttaa
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integrated database retrieval system
