Helicobacter pylori v225d: HPV225_0818
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Entry
HPV225_0818 CDS
T01899
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00740
Riboflavin metabolism
hpv00790
Folate biosynthesis
hpv01100
Metabolic pathways
hpv01110
Biosynthesis of secondary metabolites
hpv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
HPV225_0818 (ribB)
00790 Folate biosynthesis
HPV225_0818 (ribB)
Enzymes [BR:
hpv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
HPV225_0818 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
HPV225_0818 (ribB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
RE_TdeIII
Motif
Other DBs
NCBI-ProteinID:
ADI34889
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All DBs
Position
complement(806709..807743)
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AA seq
344 aa
AA seq
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MILKRVTEALEAYKNGEMLIVMDDEDRENEGDLVLAGIFSTPEKINFMATHARGLICVSL
TKDLANKFELPPMVSVNDSNHETAFTVSIDAKEAKTGISAFERHLTIELLCKDTTKPSDF
VRPGHIFPLIAKDGGVLARTGHTEASVDLCKLAGLKPVSVICEIMKEDGSMARRGDKFLS
DFALKHNLKTLYVSDLISYRLENESLLKMFCQEEREFLKHQTQCYTFLDHQQKNHYAFKF
KGAKTNDLAPLVRFHPIKEDFDFLTTGAFEVFFKALEYLKREGGYLIFMNTHSKENNIVK
DFGIGALVLKNLGIKDFRLLSSSEDRQYKALSGFGLKLVETISL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatcttaaaacgagttactgaagctttagaagcgtataaaaatggtgaaatgcttatt
gttatggatgatgaagacagagaaaatgagggggatttggttttagctgggattttttcc
acccctgagaaaatcaatttcatggccacgcatgctagggggttgatttgcgtgtctttg
accaaagatttagcgaataaatttgaattaccccctatggttagcgtgaatgattctaac
catgagaccgctttcacggtttccattgacgctaaagaagccaaaaccgggatttctgct
tttgaaaggcatttaacgattgaattattgtgtaaagacaccaccaagcctagcgatttt
gtgcgcccggggcatattttccctttaatcgccaaagatggaggcgtgttagcgcgcacg
ggccatactgaagcgagcgtggatttatgcaaattagctggattaaagcccgtgagcgtg
atttgtgaaatcatgaaagaagacggctctatggcgaggaggggggataaatttttgagc
gattttgccctaaagcacaacctcaaaaccctctatgtttctgatttgattagctatcgt
ttagaaaatgaaagtttgctgaaaatgttttgtcaagaagaaagggaatttttaaaacac
caaacgcaatgctacacttttttagaccaccagcaaaaaaaccattacgcttttaagttt
aagggcgcaaaaaccaatgatttagcccctttagtgcgtttccaccctatcaaagaggat
tttgattttttaacgactggcgcgtttgaagtgttttttaaggctttagaatatttaaag
cgcgaagggggctatttgatctttatgaacacgcattctaaagaaaacaatatcgttaaa
gattttgggatcggggcgttagtgttaaaaaatttggggataaaggatttcaggctttta
agctcttctgaagacaggcagtataaggctttgagcgggtttgggcttaagcttgtagaa
acgattagcctttga
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