Helicobacter pylori v225d: HPV225_0908 Help Entry HPV225_0908       CDS       T01899                                  Name (GenBank) Vacuolating cytotoxin   KO K11028   vacuolating cytotoxin Organism hpv  Helicobacter pylori v225d Pathway hpv03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hpv00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     HPV225_0908  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:hpv02000]     HPV225_0908    02044 Secretion system [BR:hpv02044]     HPV225_0908    02042 Bacterial toxins [BR:hpv02042]     HPV225_0908 Transporters [BR:hpv02000]  Other transporters   Pores ion channels [TC:1]    HPV225_0908 Secretion system [BR:hpv02044]  Type V secretion system   Autotransporter-1 (AT-1) family    HPV225_0908 Bacterial toxins [BR:hpv02042]  Type III toxins: Intracellular toxins   Others    Vacuolating cytotoxin     HPV225_0908  Type II toxins: Membrane damaging toxins   Pore-forming toxins, Other    HPV225_0908 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VacA Motif Other DBs NCBI-ProteinID:  ADI34974 LinkDB All DBs Position 891584..895465 Genome browser AA seq 1293 aa AA seqDB search MEIQQTHRKINRPLVSLALVGLLVSITPQKSHAAFFTTVIIPAIVGGIATGAAVGTVSGL LSWGLKQAEEANKTPDKPDKVWRIQAGRGFNEFPNKEYDLYKSLLSSKIDGGWDWGNAAR HYWVKGGQWNKLEVDMQDAVGTYNLSGLRNFTGGDLDVNMQKATLRLGQFNGNSFTSFKD SADRTTRVNFNAKNILIDNFLEINNRVGSGAGRKASSTVLTLQASEGITSSKNAEISLYD GATLNLASNSVKLMGNVWMGRLQYVGAYLAPSYSTINTSKVVGEVNFSHLTVGDQNAAQA GIIASKKTHIGTLDLWQSAGLNIIAPPEGGYKDKPNNTASQSGAKNDKNESAKNDKQGSS QDNSNTQVINPPNSGQKTETQPTQVIDGPFAGAKDTAVTIDSLNTKSDGTIKVGGFKASL TTNAANLNIGKGGVNLSNQASGRSLLVENLTGNITVNGALKVNGQAGGYALSGSSASFEF KAGVDTNNGTIAFNNNISLGRFVNLKASAHTVNFKDIDTGNGGFNTLDFSGVTGKVNINK LITASTNVAVKNFNINELLVKTNGVSVGEYTHFSEDIGNQSRINTVRLETGTRSIYSGGV KFKGGEKLVINDFYYAPWNYFDARNIKNVEITNKLAFGPQGSPWGTAKLMFNNLTLGHNA VMDYSQFSNVTIQGDFVNNQGTINYLVRGGNIETLSVGNAAAMMFNNSVDSATGFYKPLM NINSAQDLIKNKEHVLLKAKVIGYGNVSLGTNSISNVNLMEQFKERLALYNNNNRMDICV VRDLNDVKACGTAIGNTDMVNNPSKYNYLVGKAWKNIGISKTANGSKISVRYLGNSTPSD PTDLPKNAEDSAKKPLNNALLARSAFYSTSATPNLTAINKHNFGTIESVFELANRSKDID TLYANSGAQGRDLLQTLLIDNHDAGYARTMIDATSTNEITKQLNEANSALNNIASLDHKT SGLQTLSLSNAMILNSRLVNLSRRHTNNIDSFAKRLQALKDQKFASLESAAEVLYQFAPK YEKPTNVWANAIGGASLNNGGNTSLYGTSAGVDAYLDREVQAIVGGFGSYGYSSFSNQAN SLNSGANNANFGVYSRIFANQHEFDFEAQGAVGSDQSSLNFKSALLRDLNQSYNYLAYSA ATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFESNSTHKAALKNGASSQHLFNASAN VEARYYYGDTSYFYMNAGVLQEFASIGSKTAASLNTFKVNVARNPLNTHARVMMGGELQL AKEVFLNLGFIYLHNLISNIGHFASNLGMRYSF NT seq 3882 nt NT seq  +upstreamnt  +downstreamnt atggaaatacaacaaacacaccgcaaaatcaatcgccctttggtttctctcgctttagtg gggttattggttagcatcacaccgcaaaaaagtcatgccgcctttttcacaaccgtgatc attccagccattgttgggggcatcgctacaggtgcggctgtaggaacggtctcagggctt cttagctgggggctcaaacaagccgaagaagcgaataaaaccccggataaacccgataaa gtttggcgcattcaagcaggaagaggttttaatgaattccctaacaaggaatacgactta tacaaatcccttttatccagtaagattgatggaggttgggattgggggaatgccgctagg cattattgggtcaaaggcgggcaatggaacaagcttgaagtggatatgcaagacgctgta gggacttataacctttcagggctaagaaactttaccggtggggatttagatgtcaatatg caaaaagccactttacgcttgggccaattcaatggcaattctttcacaagctttaaggat agcgctgatcgcaccacgagagtgaatttcaacgctaaaaatatcttaattgataatttt ttagaaatcaataatcgcgtgggttctggagccggtaggaaagctagctctacggtttta actttgcaagcttcagaagggatcactagcagtaaaaacgctgaaatttctctttatgat ggcgctacgcttaatttggcttcaaacagcgttaaattaatgggtaatgtgtggatgggc cgtttgcaatatgtgggagcgtatttagccccttcatacagcacgataaacacttcaaaa gtggtaggggaagtgaattttagccacctcactgtgggcgatcaaaacgccgctcaagca ggcattattgccagtaaaaagactcatattggcacactggatttgtggcaaagcgcgggg ttaaatatcattgcccctccagaaggcggctataaggataaacctaataacaccgcctct caaagtggtgctaaaaacgacaaaaatgaaagtgctaaaaacgacaaacaagggagcagt caagataatagtaacactcaggtcattaacccacccaatagcgggcaaaaaacagaaact caacccacacaagtcattgatgggccttttgctggcgccaaagacacggctgtcactatt gatagcttaaacaccaaatctgatggcacgattaaagtgggagggtttaaagcttctctt accaccaatgcggctaatttgaatatcggcaaaggcggtgtcaatctgtccaatcaagcg agcgggcgctctcttttagtggaaaatctcaccggcaatatcaccgttaatggggcttta aaagtgaatggccaagcgggtggttatgccctttcaggttcgagcgcgagttttgagttt aaggctggtgtggataccaacaacggcacaatcgcttttaataacaatatcagtctggga agatttgtgaatttaaaagcgagcgctcatacggtcaattttaaagatattgatactggt aatggtggtttcaacaccttagactttagtggtgttacaggcaaggtcaatatcaacaag ctcattacagcttccactaatgtggccgttaaaaacttcaacattaatgaattgttggtt aaaaccaatggggtgagcgtgggagaatacactcattttagcgaagatataggcaatcaa tcgcgcatcaacaccgtgcgtttagaaactggcaccaggtcaatctattctgggggtgtt aaatttaaaggcggtgaaaaactggttatcaatgatttttactacgccccttggaattat tttgacgctagaaatattaagaatgttgaaatcaccaataaacttgcttttgggcctcaa ggaagcccttggggcacggcaaaacttatgtttaataatctaaccctaggccataatgca gtcatggattatagtcaattttcaaatgtaaccattcagggggattttgtcaataatcaa ggcactatcaattatttggttcgaggcgggaacatagaaaccttaagcgtaggcaatgca gctgctatgatgtttaataatagcgtggatagtgcgactggattttacaaaccgctcatg aatattaacagcgctcaagatctcattaaaaataaagaacatgtcttattgaaagcgaaa gtcattggttatggcaatgtttctttaggcactaacagcattagtaatgtgaatctaatg gagcagttcaaagagcgcctagccctttataacaacaataaccgcatggatatttgtgtg gtgcgcgatctcaatgatgttaaagcatgcgggacggctatcggcaatactgatatggtg aataaccctagcaagtataactaccttgtgggtaaagcatggaagaatatagggattagc aaaacagctaacggctctaaaatttcggtgcgttacttaggcaattccacaccttctgat cctacagatttacctaaaaacgctgaagacagcgctaaaaaaccactaaacaacgcgctt ttggcccgctctgctttctattcaactagcgccactcctaatttaaccgctatcaataag cataactttggcaccattgaaagcgtgtttgaattggctaaccgctctaaagatattgac acgctttatgctaactcaggcgcgcaaggcagggatctcttacaaactttattgattgat aaccatgatgcaggttatgccagaaccatgattgatgctacaagcactaatgaaatcacc aagcaattgaatgaagccaatagtgctttaaacaacatagccagtttggatcataagaca agcggcttgcaaactttgagcttgagcaatgcgatgattttaaattctcgtttagtcaat ctctccagaaggcacaccaacaatattgactcattcgccaaacgcttgcaagctttaaaa gatcagaaattcgcttctttagaaagcgcggcagaagtgttgtatcaatttgcccctaaa tatgaaaaacccaccaatgtttgggctaacgctattggaggagcgagcttgaataatggc ggcaacacttcattgtatggcacaagcgcaggcgtagatgcttaccttgacagggaagta caagccattgtaggcggatttggaagctatggttatagctcttttagcaatcaagcgaac tctcttaattctggggccaataacgctaattttggcgtgtatagccgtatctttgctaac cagcatgaatttgattttgaagctcaaggggctgtagggagtgatcaatcaagcttgaat ttcaaaagcgctttattgcgagatttgaatcaaagctacaattacttagcctatagcgct gcaacaagagcgagctatggttatgacttcgcgttttttaggaacgctttagtgttaaaa ccaagcgtgggcgtgagctataaccatttaggttcaaccaactttgaaagcaacagcacc cataaagcggctttaaaaaatggtgccagcagtcagcatttattcaacgctagcgctaat gtggaagcgcgctattattatggggacacttcatacttctatatgaatgctggagtttta caagaattcgcttcaattggctctaaaacggccgcatctttaaacacctttaaagtgaat gttgctcgcaatcctttaaatactcatgctagagtgatgatgggtggggaattgcaatta gctaaagaagtgtttttgaatttgggctttatttatttgcacaatttgatttccaatata ggccatttcgcttccaatttaggaatgaggtatagtttctaa

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