Helicobacter pylori v225d: HPV225_0939
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Entry
HPV225_0939 CDS
T01899
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00220
Arginine biosynthesis
hpv00240
Pyrimidine metabolism
hpv00250
Alanine, aspartate and glutamate metabolism
hpv01100
Metabolic pathways
hpv01110
Biosynthesis of secondary metabolites
hpv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HPV225_0939 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HPV225_0939 (carB)
00220 Arginine biosynthesis
HPV225_0939 (carB)
Enzymes [BR:
hpv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HPV225_0939 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
ADI35003
LinkDB
All DBs
Position
complement(925903..929160)
Genome browser
AA seq
1085 aa
AA seq
DB search
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHQTYIQPITPENIATIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEA
IKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELVKNALDASPINEILIEESLLGWKEYEMEVIRDNKDNCIIVCCIENIDPMGV
HTGDSITIAPSLTLTDKEYQRMRDVSFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIR
RPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDPKKLRG
LKNLGFSDARIAAKIKENENLEVSPFEVELARMNLQIAPHFEEVDTCAAEFLSLTPYLYS
TYAPNPLPPIENKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNC
NPETVSTDYDTSDTLYFEPIHFECVKRIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPI
IGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLG
GQHMQILENIEELHHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGI
LQHIEEAGIHSGDSACFIPSTLSPKILDEIERVSAKIALHLGVVGLLNIQFAVHDNTLYL
IEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMP
HFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLI
FVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNVMDLM
MNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSAIEVLILALEESSKEDELLAL
QDYLK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgatatttccaacatcctactgataggctcaggccctattgtgatc
gggcaagcttgcgagtttgactactcagggactcaaagttgtaaaaccttaaaatcttta
ggttatagagtgatcttaatcaattctaacccggccaccgtgatgactgaccctgaattt
tctcatcaaacttatatccaacccatcaccccagaaaatatcgccactatcatcaaaaaa
gaaaagattgacgctattttacccacaatgggcgggcaaaccgctttgaatgcggtcatg
caaatgcaccaaaagggcatgttagaaggcgtggagcttttaggggctaagattgaagcg
attaaaaaaggcgaagacaggcaggctttcaaagaagcgatgttaaagatcgggatggat
ttgcctaaagggcgttacgcttatagcgagttagaagccctagaagccattaatgaaatt
ggctttccagccattattagagcgagtttcactctggctgggggggggagtggggtcgct
tataatattgaagagtttcaagaattggttaaaaacgccctagacgcttcgcccattaat
gaaattttgattgaagagtccttattggggtggaaagaatatgaaatggaagtcatacga
gataacaaggataattgcatcattgtgtgctgtattgaaaatattgaccccatgggcgtt
catactggcgatagcatcaccatcgctccaagcctaaccttaaccgataaagaataccaa
cgcatgcgcgatgtgagttttgcgattttaagagaaattggcgtggatacgggcgggagc
aatgtgcaattcgctatccacccagagactttaagaatggtcgtgattgaaatgaaccca
cgagtgagccgcagctccgcattagcttcaaaagcgaccgggtttcccattgcaaaagtg
gctaccatgcttgcggtgggttttagcttagatgaaatccaaaacgatattaccaacacc
ccagcgagttttgagcctagtttagattatatcgtggtgaaaatccctcgctttgcgttt
gaaaaatttgccggtgtttctagcactttagggacttctatgaaaagcattggcgaagtg
atggcgataggggggaatttcttagaagccctacaaaaagcgttatgctctttggaaaac
aattggctagggtttgaatcgttaagcaaagatttagaaatgataaaaaaggaaatccgc
cggccgaatttcaagcgcttgctctatatcgctgatgcgttcaggcttggcgtttgtgtt
gatgaagtgtttgaattatgccagattgacaggtggtttttatctcaaatccaaaagcta
gtcaaagcagaagaaagcatcaattctagcgttttaacggaccctaaaaaattaagaggg
cttaaaaatttaggctttagcgatgctaggattgccgctaaaatcaaagaaaatgaaaat
ttagaggtgagtccttttgaagtggaattagccagaatgaatttgcaaatcgcgccccat
tttgaagaggtggatacttgcgcggcggagtttttatcgctcacgccttatttgtattcc
acctatgcccctaaccctttgcctcctattgaaaacaaacaagaaaaacaagaaaagaaa
atcctaatcataggctctgggcctaatcgcatcggtcaaggcattgaatttgattattgt
tgcgtgcatgcgagctttgctttgaaagatttaaatattaaaagcgtcatgctcaattgc
aatccagaaactgtgagcacggattatgatacaagcgatacgctctattttgaacccatt
cattttgagtgcgtgaagagaatcattcaaagggagcgagtggatggcattatcgtgcat
tttgggggacaaacccctttaaaactcgctaaagatctagctaaaatgcaagcccccatt
attggcacgccttttaaggtgattgatattgcagaagatagggaaaaattttccctcttt
ttaaaagagcttgacatcaagcagcctgaaaatggcatggctaagagtgttgatgaagcc
tatagcatcgctaatgtgattggtttccctattatcgtgcgccctagttatgtgctaggt
ggccaacacatgcaaattttagaaaatattgaagaactgcaccattatttagaaagcgtt
acgcatgctttagagattagccctaaaaacccgctcctcattgataagtttttagaaaaa
gcggtggaattagatgtggatgctatttgcgataaaaaagaggtctatattgccggcatt
ttacagcacattgaagaagccggaatccattcaggcgattcggcgtgctttatcccttcc
actttaagccctaaaattttagatgaaattgagcgagtgagtgcgaaaatcgctctgcat
ttaggcgtagtagggctattgaatatccaatttgctgtgcatgacaacacgctgtatttg
attgaagtcaatcccagagccagccgaaccgtgccttttttaagcaaggctttaggcgtt
cctttagcgaaagtagcgactagggttatggtgttagaagatttgaaagaagccttgaag
ttctatgataaaaaaaatatcgtgggatattctaaaggcgtttataagcctaaaatgccc
cattttgtggctttaaaagaagcggttttcccttttaataaactttatggatcggatttg
attttggggcctgagatgaaaagcaccggcgaagtgatggggattgctagatctttaggg
ttggcttttttcaaggctcaaacggcttgctttaaccccattaaaaacaaggggcttatt
tttgtttctattaaagataaggataaagaagaagcatgcgttttaatgaagcgcttggtt
cagttaggctttgaattgtgcgctacagaaggcacgcataaagctttggaaaaagccggg
gtggagtctttgaaagtgcttaaaatctccgaaggccgccccaatgtcatggatttaatg
atgaatggggaaatcagcatggctatcaacaccagcgatcacaaatctcaagatgacgcc
aaactcattcgtgcttctgtgcttaaaaatcatgtgagctatttcacgactttaagcgcg
atagaagttttgattttagcgttagaagaaagttctaaagaagacgagttgttggccttg
caagattatttgaagtag
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integrated database retrieval system
