Helicobacter pylori v225d: HPV225_1110
Help
Entry
HPV225_1110 CDS
T01899
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpv
Helicobacter pylori v225d
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpv03016
]
HPV225_1110 (truA)
Enzymes [BR:
hpv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPV225_1110 (truA)
Transfer RNA biogenesis [BR:
hpv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPV225_1110 (truA)
Prokaryotic type
HPV225_1110 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADI35156
LinkDB
All DBs
Position
1095940..1096668
Genome browser
AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFYAQKHWNAAKLFYHLAPKLAPHVVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRAIFNAFAYKTFIIGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQVQIHNIKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagcgctttaaatgcgctagggatt
aaaagcgttgtggttgcggccgggcgcacggataaaggcgtgcatgccaacaatcaagtg
ctgtctttttacgctcaaaaacactggaatgccgctaaattattttatcatctagcccct
aaactcgctccgcatgttgtcttaaaaaaactagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactggatgcattaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggctacaaccaat
cctaaacgtgctatttttaacgcttttgcttataaaacctttatcatagggcatgagtgt
gtggtgtttaaaatcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagtgcaaatccac
aacatcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
DBGET
integrated database retrieval system
