Helicobacter pylori v225d: HPV225_1173
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Entry
HPV225_1173 CDS
T01899
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv02024
Quorum sensing
hpv03060
Protein export
hpv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HPV225_1173 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPV225_1173 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPV225_1173 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hpv02044
]
HPV225_1173 (ffh)
Enzymes [BR:
hpv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HPV225_1173 (ffh)
Secretion system [BR:
hpv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HPV225_1173 (ffh)
Eukaryotic Sec-SRP protein
HPV225_1173 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
AAA_22
Zeta_toxin
AAA_30
AAA_24
nSTAND3
AAA_17
SLFN-g3_helicase
cobW
NPHP3_N
AAA_19
6PF2K
APS_kinase
ArsA_ATPase
AAA_16
AAA_14
Fer4_NifH
T2SSE
AAA
AAA_11
AAA_33
ABC_tran
NTPase_1
Thymidylate_kin
ParA
KTI12
NACHT
ResIII
AAA_5
TsaE
AAA_18
PhageMin_Tail
ParBc
YqeC
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ADI35215
LinkDB
All DBs
Position
complement(1151750..1153096)
Genome browser
AA seq
448 aa
AA seq
DB search
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSASAFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcattaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagatcgggcgttagatgaattgaaaaaaacgcttttgaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaacgaaacttaat
ggcattggtaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccctaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcagggcgtttagccattgataaagagcttatgcaagaattaaaagaagtt
aaagaaatcttaaacccccatgaggtgctgtatgtcgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgagcgcatttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgacagcgattctaaagggggtatcgccttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaagctatggtcaattccatgactaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaagctaaa
aatcaaacaccccctaaaatgcgctga
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