Helicobacter pylori v225d: HPV225_1277
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Entry
HPV225_1277 CDS
T01899
Name
(GenBank) outer membrane protein (omp19)
KO
K15847
outer membrane protein BabA
Organism
hpv
Helicobacter pylori v225d
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
AP205_coat
RmuC
DUF6299
Motif
Other DBs
NCBI-ProteinID:
ADI35310
LinkDB
All DBs
Position
complement(1254439..1256559)
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AA seq
706 aa
AA seq
DB search
MKKTLLLSLSLSFLLHAEDDGFYMSAGYQIGEAAQMVTNTGEIQKLSDKYESLNNLLTRY
STLNNLIQLSSDPSTINEVRDNLGSSSRNLLNEKTNSPAYQAVLLALNAAVGLWQVTSYA
FTACGPGSNESANGGIQTFNNVPGQNTTTITCNSYYQPGHGGPISTENYAKINQAYQIIQ
KALTANGSNGDGVPVLSNTTTKLDFTINGDKRTGGKLNNPLVYPWSHGKAISTSWENTTT
TQTETKIDTTNNAQELLKQASVIITTLNEACPNFQNGGSRYWPGISGNGTMCGMFANEIS
AIQGMIANAQEAVAQAKIVSENTQNQSNLDTAKPFNPYTDASFAEGMLANAQAQAEILNQ
AEQVVKNFEKIPTAFVNGSLGVCYQVEGGERRGTNPGQTTTNTWGAGCAYVEQTITNLNN
SIAHFGTKEQQIEQAENIADTLVHFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKN
NPYSPQGIETNYYLNQGAYNQIQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQ
FFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNN
KLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNFARSKKKG
SDHVAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacccttttactctctctctctctctcgtttttgctccacgctgaagacgat
ggcttttacatgagtgcgggctatcaaatcggtgaagccgctcaaatggtaacaaacaca
ggagaaatacaaaagctttcggataagtatgaaagtttgaacaatcttttaaccagatac
agcaccttaaacaaccttatccaattatcctctgatccgagcacgattaacgaagtaagg
gataatctgggctcaagctctaggaatttgcttaatgaaaaaaccaattccccggcgtat
caagccgtgcttttagcgctgaatgctgcagtggggttgtggcaagttacaagctatgct
tttactgcttgtggtcctggcagtaatgagagtgcaaatggaggtatccaaacttttaat
aatgtgccaggacaaaatacgacgaccatcacttgcaattcgtattaccaaccaggacat
ggtgggcctatatccactgaaaattacgcgaaaatcaatcaagcctatcaaatcattcaa
aaggctttgacagcgaatggatctaatggagatggggttcccgttttaagcaacaccact
acaaaacttgatttcactatcaatggagacaaaagaacgggtggcaaactaaataatcct
ttagtatacccatggagtcatgggaaagctatttcaacctcgtgggaaaacacaacaaca
acacaaacagaaacaaagatcgacacaaccaataacgctcaagagcttttaaaacaagcg
agcgtcattatcactaccttaaatgaggcatgcccaaacttccagaatggtggtagtagg
tattggccagggataagcggcaatgggacaatgtgtgggatgtttgccaatgaaatcagc
gctatccaaggcatgattgctaacgcacaagaagctgtcgcacaagccaaaatcgttagt
gaaaacacgcaaaatcagagcaacctagacactgcaaaaccattcaacccctacacagac
gctagctttgctgaaggcatgctcgctaacgctcaagctcaagcggagattttaaaccaa
gccgaacaagtagtgaaaaactttgaaaaaatccctacagcctttgtaaatggctcttta
ggggtgtgttatcaagtggaaggcggtgagcgtaggggcaccaatccaggtcagacaact
actaacacttggggggccggttgcgcctatgtggagcaaaccataacgaatttaaacaac
agcatcgctcattttggcaccaaagagcagcaaatagagcaagcagaaaatatcgctgac
actctagtgcatttcaaatctagatacagcgaattgggcaacacctataacagcatcacc
accgcgctctctaaagtccctaacgctcaatctttgcaaaatgtggtgagtaaaaagaac
aacccctatagcccgcaaggcatagaaaccaattactacctcaatcaaggcgcttataac
caaatccaaaccatcaaccaagaactcggacgaaacccctttaggaaattgggcatcgtc
agctctcaaaccaacaacggcgcgatgaatgggatcggtattcaagtgggctacaaacaa
ttctttggccaaaaaagaaagtggggcgctaggtattacggcttttttgattacaaccat
gcgttcatcaaatccagctttttcaactcggcctctgatgtatggacttatggttttgga
gcggacgctctttataacttcatcaacgataaagccaccaatttcttaggcaaaaacaac
aagctttctgtggggctttttggcgggattgcgttagcgggcacttcatggcttaattct
gagtatgtgaatttagccaccgtgaataatgtctataacgctaaaatgaatgtggcgaat
ttccaattcttattcaacatgggagtgaggatgaatttcgccaggtctaagaaaaaaggc
agcgatcatgtggctcagcatggcattgaactagggcttaaaatccccaccattaacacg
aactactattcctttatgggggctgaactcaaataccgcaggctctatagcgtgtatttg
aactatgtgttcgcttactaa
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