Helicobacter pylori v225d: HPV225_1472
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Entry
HPV225_1472 CDS
T01899
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv03030
DNA replication
hpv03430
Mismatch repair
hpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPV225_1472
03430 Mismatch repair
HPV225_1472
03440 Homologous recombination
HPV225_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpv03032
]
HPV225_1472
03400 DNA repair and recombination proteins [BR:
hpv03400
]
HPV225_1472
Enzymes [BR:
hpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPV225_1472
DNA replication proteins [BR:
hpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPV225_1472
DNA repair and recombination proteins [BR:
hpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPV225_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADI35493
LinkDB
All DBs
Position
complement(1426944..1427807)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETLPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcgtgtgggcttaatttcgtagaaacgagtgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtaaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagtgcgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttggggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaaca
acgatggatttgattgatttttccaaatgtgctaacactttgatcaaaagacccccaaga
gccagacaccaagagactctaccgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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integrated database retrieval system
