Helicobacter pylori v225d: HPV225_1537
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Entry
HPV225_1537 CDS
T01899
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv03420
Nucleotide excision repair
hpv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPV225_1537
03430 Mismatch repair
HPV225_1537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpv03400
]
HPV225_1537
Enzymes [BR:
hpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPV225_1537
DNA repair and recombination proteins [BR:
hpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPV225_1537
MMR (mismatch excision repair)
Other MMR factors
HPV225_1537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADI35554
LinkDB
All DBs
Position
1493746..1495791
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDHLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
VKTLCKQLKISSFRASISQIKNGMIDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSVEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVGFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPSRGLGKITQEWIFSLLDGEGLN
LEEALKLGVFKGKLNPKNEHALNKFITMIGRLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLALVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLKQDNPPKQDHKKDTPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISVKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagaccatttgaacgaagcgcaaaaaatcgccgcaagc
cacattcaagggcctttgctgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaagcccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttagacagcgatgaa
gtaaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcaaatc
aaaaacggcatgattgatttaagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgcttaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttacaagataatgaaaccatcgccaaagaaactagcgagcgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctccagcgttgaaattttagcgtgcgctaactccctt
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaagggctcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttagatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggagcggtgggtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagtggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccctcaaga
ggccttggtaagatcactcaagaatggattttttctcttttagatggtgaaggtttgaat
ttagaagaagcgctaaaacttggggtgtttaaaggcaaattaaaccctaaaaacgaacac
gctttgaataaatttatcactatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttagctttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagcgttctagacacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaaggggtta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagccatcactagggct
aaagaaggattgcaactctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagccaagttgctcaagcaagacaacccccctaaa
caggatcacaaaaaagatacgcctattaaagtgggggatttgatcaggcataagattttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagtaaaatttgtagaaaaagtggataacggg
ttttga
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