Helicobacter pylori v225d: HPV225_1566
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Entry
HPV225_1566 CDS
T01899
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpv
Helicobacter pylori v225d
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpv03016
]
HPV225_1566 (trmE)
Transfer RNA biogenesis [BR:
hpv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPV225_1566 (trmE)
Prokaryotic type
Methyltransferases
HPV225_1566 (trmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
Ras
AAA_29
ATP_bind_1
MMR_HSR1_Xtn
Arf
GCV_T
AAA_15
AAA_16
ATP-synt_ab_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ADI35582
LinkDB
All DBs
Position
complement(1523620..1525005)
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AA seq
461 aa
AA seq
DB search
MKNTSSSTTSTMNDTIAAIATPLGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVRD
IFSNGVLLDKALVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFS
KKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEV
LIDYSEEDIPSDFLNEVSLNLEKQIASFKDLLDFSNTQRQKNKGHALSIVGKPNAGKSSL
LNAMLLEERALVSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKS
LENCDIVLGVFDLSKPLEKEDFNLIDALNRAKKPCIVVLNKNDLAPKLELEILKSYLKIP
YSLLETNTLNSKACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHL
ETLELFSYHLLSAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatcgtcatcaacgacttcaacaatgaatgacaccatcgccgctatcgct
acccctttaggcaagggagcgattagcgttattaaaatcagcggcaataacgctctaaac
atcctcaaacaactcacccaaaaacaagacttcacccccagatacgcttatgtgcgcgat
attttttctaatggtgttttattggacaaagcgttagtgatttatttcaaagccccctat
agtttcactggtgaagatgtgtgcgaaatccaatgccatggaaacccccttctagcgcaa
aatatcttacaagcttgcttgaatttaggggctaggcttgctaaagcgggggaatttagt
aaaaaagcctttttaaaccataaaatggatttgagcgagattgaagcgagcgttcagctc
atcctttgtgaagatgaaagcgttttaaacgctctagccaggcagcttaagggcgagtta
aaaatttttattgaagaggctagaggcaatcttttaaagcttttggcgagctcagaagtt
ttgattgattatagcgaagaagacattcctagcgattttttaaatgaagtatctcttaat
ttagaaaaacaaatcgcctcttttaaagacttactggatttttctaacacacaaagacaa
aaaaacaaagggcatgccttaagcattgttggcaaacccaatgccggcaaaagctcttta
ttaaacgccatgcttttagaagaaagggctttagtgagcgatattaaaggcacaacaaga
gacactatagaagaagtcattgaattgcaagggcataaggtgcgcttgattgatacggct
ggcattagagagagcgcggataaaatagaacgattagggattgaaaaaagccttaaaagt
ttagaaaattgcgacattgttttaggcgtgtttgatctttctaaacccctagaaaaagaa
gattttaaccttattgatgcccttaatcgcgctaaaaagccttgcattgttgttttgaat
aaaaacgatttagcgcccaaactggagcttgaaatcttaaaatcttaccttaaaatccct
tattctttactagaaaccaacaccctaaattccaaggcttgtttgaaagatttgagccaa
aaaatcagcgcctttttccccaaactagacactcaaaacaagctcttactcacttcccta
gcccaaaaaaccgccctagaaaacgccatttttgaattgcaaaacgctaaaaaccattta
gaaactttagagcttttttcttatcatcttttaagcgcgatagaaaacttgaacttgctc
acccgcccttatgaaaccagccaaatgctagacagcatgttcagcgagttttgcttaggc
aaatga
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