KEGG   Helicobacter pylori v225d: HPV225_1566
Entry
HPV225_1566       CDS       T01899                                 
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
hpv  Helicobacter pylori v225d
Brite
KEGG Orthology (KO) [BR:hpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpv03016]
    HPV225_1566 (trmE)
Transfer RNA biogenesis [BR:hpv03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    HPV225_1566 (trmE)
 Prokaryotic type
   Methyltransferases
    HPV225_1566 (trmE)
SSDB
Motif
Pfam: TrmE_N MnmE_helical MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase AIG1 GTP_EFTU ABC_tran Ras AAA_29 ATP_bind_1 MMR_HSR1_Xtn Arf GCV_T AAA_15 AAA_16 ATP-synt_ab_N FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ADI35582
LinkDB
Position
complement(1523620..1525005)
AA seq 461 aa
MKNTSSSTTSTMNDTIAAIATPLGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVRD
IFSNGVLLDKALVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFS
KKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEV
LIDYSEEDIPSDFLNEVSLNLEKQIASFKDLLDFSNTQRQKNKGHALSIVGKPNAGKSSL
LNAMLLEERALVSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKS
LENCDIVLGVFDLSKPLEKEDFNLIDALNRAKKPCIVVLNKNDLAPKLELEILKSYLKIP
YSLLETNTLNSKACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHL
ETLELFSYHLLSAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaaaaatacatcgtcatcaacgacttcaacaatgaatgacaccatcgccgctatcgct
acccctttaggcaagggagcgattagcgttattaaaatcagcggcaataacgctctaaac
atcctcaaacaactcacccaaaaacaagacttcacccccagatacgcttatgtgcgcgat
attttttctaatggtgttttattggacaaagcgttagtgatttatttcaaagccccctat
agtttcactggtgaagatgtgtgcgaaatccaatgccatggaaacccccttctagcgcaa
aatatcttacaagcttgcttgaatttaggggctaggcttgctaaagcgggggaatttagt
aaaaaagcctttttaaaccataaaatggatttgagcgagattgaagcgagcgttcagctc
atcctttgtgaagatgaaagcgttttaaacgctctagccaggcagcttaagggcgagtta
aaaatttttattgaagaggctagaggcaatcttttaaagcttttggcgagctcagaagtt
ttgattgattatagcgaagaagacattcctagcgattttttaaatgaagtatctcttaat
ttagaaaaacaaatcgcctcttttaaagacttactggatttttctaacacacaaagacaa
aaaaacaaagggcatgccttaagcattgttggcaaacccaatgccggcaaaagctcttta
ttaaacgccatgcttttagaagaaagggctttagtgagcgatattaaaggcacaacaaga
gacactatagaagaagtcattgaattgcaagggcataaggtgcgcttgattgatacggct
ggcattagagagagcgcggataaaatagaacgattagggattgaaaaaagccttaaaagt
ttagaaaattgcgacattgttttaggcgtgtttgatctttctaaacccctagaaaaagaa
gattttaaccttattgatgcccttaatcgcgctaaaaagccttgcattgttgttttgaat
aaaaacgatttagcgcccaaactggagcttgaaatcttaaaatcttaccttaaaatccct
tattctttactagaaaccaacaccctaaattccaaggcttgtttgaaagatttgagccaa
aaaatcagcgcctttttccccaaactagacactcaaaacaagctcttactcacttcccta
gcccaaaaaaccgccctagaaaacgccatttttgaattgcaaaacgctaaaaaccattta
gaaactttagagcttttttcttatcatcttttaagcgcgatagaaaacttgaacttgctc
acccgcccttatgaaaccagccaaatgctagacagcatgttcagcgagttttgcttaggc
aaatga

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