Helicobacter pylori v225d: HPV225_1620
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Entry
HPV225_1620 CDS
T01899
Name
(GenBank) regulatory protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpv
Helicobacter pylori v225d
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpv01011
]
HPV225_1620
Enzymes [BR:
hpv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPV225_1620
Peptidoglycan biosynthesis and degradation proteins [BR:
hpv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPV225_1620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
SLT_2
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
ADI35634
LinkDB
All DBs
Position
complement(1574845..1575969)
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AA seq
374 aa
AA seq
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MPKRMKCFSQKWLVFFVTHWLLLASLGHAKMAFESNIDTKALEAFGVNAGFLSQMPNALK
KMNKEEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVG
IWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRK
VQNAIKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKNKEYLLNRGAR
VSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFK
QRQLKQNKNIQASSKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRL
IIPTNKKLLATREF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaatgaagtgttttagtcaaaaatggttggttttttttgttacccattgg
cttttattggcttctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaa
gcgttagaggcttttggggttaatgcgggctttttatcccagatgccaaacgctctaaaa
aaaatgaataaagaagaagaatggaaaaagttagtcaaaaggtttgatgtgaattaccag
ttcatccccatcattaaaaacatgctaatagaagcgagcgtgccgcaagaatttttattt
ttagccatggcagagtctaaattttcatcaagggcttatagcaggaaaaaagcggtaggg
atttggcaattcatgccaagcacggctaaagaattagggcttaaagtcaatcattacatt
gatgaaagaagagatcccattaaaagcactcaagcggcgatcacttatttgaaacggctc
tacaagcaaaccggggagtggtatttggtcgctatggcgtataattacggcttgcgcaag
gttcaaaacgccattaaagccgccggcacttcggacattaagattttgttagatgaagat
aaaaagtatctccctaaagagacacgagagtatatccgctccattctaagcctggcgtta
aaattcaacagcttggacaacctcaaaaataaagagtatttgctcaatcgtggggcgagg
gtgagtttagtgggcgttccgtttaaaaggcacacttctttagtccaagtggctaaaaat
ttaaacttgagtttagaaaccttaaaatcctacaaccaccaattccgctataacattctg
ccttctaaagaccccacctacaccatttatatcccttatgaaaaactcgcccttttcaaa
caacgccagctcaaacaaaataaaaacattcaagccagttcaaaaagcccttttatcacc
catgtggtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatt
tctagtatccaattagccaataacctcaaagattctaacatttttatccaccagcgctta
atcatccccaccaataagaaattgctcgctacaagggaattttaa
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